RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PAX2Q02962 417 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 COX10Q12887 443 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 FAM98BQ52LJ0 330 aaKnown RBP12.31□□□□□ -0.44
PNKP-202ENST00000593706 GPR157Q5UAW9 335 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 OR2T5Q6IEZ7 315 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 C16orf87Q6PH81 154 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 FBXW12Q6X9E4 464 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 LINC00471Q8N535 108 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 OR2T29Q8NH02 315 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 OR4K13Q8NH42 304 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 BCAS4Q8TDM0 211 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 APOBEC3DQ96AK3 386 aaPredicted RBP12.31□□□□□ -0.44
PNKP-202ENST00000593706 SLC7A6OSQ96CW6 309 aaPredicted RBP12.31□□□□□ -0.44
PNKP-202ENST00000593706 NUDT16L1Q9BRJ7 211 aaKnown RBP12.31□□□□□ -0.44
PNKP-202ENST00000593706 DGCR6LQ9BY27 220 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 HDHD2Q9H0R4 259 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 CLN8Q9UBY8 286 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 B9D1Q9UPM9 204 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 H0YL77 283 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 MLNRO43193 412 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 CCNB2O95067 398 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 RAP2AP10114 183 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 GGT2P36268 569 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 CENPAP49450 140 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 TRAP1Q12931 704 aaKnown RBP12.3□□□□□ -0.44
PNKP-202ENST00000593706 PPP1R8Q12972 351 aaKnown RBP12.3□□□□□ -0.44
PNKP-202ENST00000593706 MICAQ29983 383 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 RSPO1Q2MKA7 263 aaPredicted RBP12.3□□□□□ -0.44
PNKP-202ENST00000593706 CLEC12AQ5QGZ9 265 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 RPL13AP3Q6NVV1 102 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 DNM1P34Q6PK57 102 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 RASSF6Q6ZTQ3 369 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 AQP11Q8NBQ7 271 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 SDR9C7Q8NEX9 313 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 SLC30A2Q9BRI3 323 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 THTPAQ9BU02 230 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 HCAR1Q9BXC0 346 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 FN3KQ9H479 309 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 WDR76Q9H967 626 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 MARCH7Q9H992 704 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 RPRD1BQ9NQG5 326 aaKnown RBP12.3□□□□□ -0.44
PNKP-202ENST00000593706 KIF17Q9P2E2 1029 aa12.3□□□□□ -0.44
PNKP-202ENST00000593706 SAMHD1Q9Y3Z3 626 aaKnown RBP12.3□□□□□ -0.44
PNKP-202ENST00000593706 A0A1B0GUS0 222 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 ARRDC5A6NEK1 342 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 FAM181BA6NEQ2 426 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 AQP12BA6NM10 295 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 IQCF6A8MYZ5 107 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 PHYHO14832 338 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 PSKH1P11801 424 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 SELEP16581 610 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 RAG2P55895 527 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 FGF12P61328 243 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.29□□□□□ -0.44
PNKP-202ENST00000593706 ZNF181Q2M3W8 571 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 DEFB112Q30KQ8 113 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 FAM201AQ5SY85 155 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 SLC35F1Q5T1Q4 408 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 SLC18B1Q6NT16 456 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 BRICD5Q6PL45 260 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 CD300LDQ6UXZ3 194 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 CFAP77Q6ZQR2 320 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 DCDC5Q6ZRR9 648 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 AQP12AQ8IXF9 295 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 LNX2Q8N448 690 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 GJC3Q8NFK1 279 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 OR11L1Q8NGX0 322 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 OR4F5Q8NH21 305 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 ZNRF4Q8WWF5 429 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 WFDC12Q8WWY7 111 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 TECTBQ96PL2 329 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 CHID1Q9BWS9 393 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
PNKP-202ENST00000593706 BEX1Q9HBH7 125 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 PNRC2Q9NPJ4 139 aaKnown RBP12.29□□□□□ -0.44
PNKP-202ENST00000593706 TMEM100Q9NV29 134 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 MRPL22Q9NWU5 206 aaKnown RBP12.29□□□□□ -0.44
PNKP-202ENST00000593706 CYB5R1Q9UHQ9 305 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 MMP24Q9Y5R2 645 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 U3KQV3 271 aa12.29□□□□□ -0.44
PNKP-202ENST00000593706 KIR2DS1A0A191URI9 304 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 ENSAO43768 121 aaKnown RBP12.28□□□□□ -0.44
PNKP-202ENST00000593706 RENP00797 406 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 HLA-DPB1P04440 258 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 NOS3P29474 1203 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 PRSS12P56730 875 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 GK3PQ14409 553 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 CORO6Q6QEF8 472 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 FIP1L1Q6UN15 594 aaKnown RBP12.28□□□□□ -0.44
PNKP-202ENST00000593706 COLCA1Q6ZS62 124 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 KIR3DL3Q8N743 410 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 OR52L1Q8NGH7 329 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 OR4Q3Q8NH05 313 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 CANT1Q8WVQ1 401 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 DACT3Q96B18 629 aaPredicted RBP12.28□□□□□ -0.44
PNKP-202ENST00000593706 COQ7Q99807 217 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms