RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-217	ENST00000592905	ORC6	Q9Y5N6	252 aa		12.85	□□□□□ -0.35
ERCC1-217	ENST00000592905	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	1e-6	■■□□□ 14.1
ERCC1-217	ENST00000592905	IGHV3-64D	A0A0J9YX35	117 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	IQCF6	A8MYZ5	107 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	INAFM1	C9JVW0	142 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	HLA-DPB1	P04440	258 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	IGHV4-31	P0DP07	118 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	ALOX5AP	P20292	161 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	ZNF121	P58317	390 aa	Predicted RBP	12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	MVK	Q03426	396 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	ZSCAN26	Q16670	478 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	ZMAT1	Q5H9K5	638 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	LCN1P1	Q5VSP4	162 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	NXNL2	Q5VZ03	156 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	FAM57B	Q71RH2	274 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	MRPL21	Q7Z2W9	205 aa	Known RBP	12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	ZNF454	Q8N9F8	522 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	ITLN1	Q8WWA0	313 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	STMN2	Q93045	179 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	SOX7	Q9BT81	388 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	C9orf16	Q9BUW7	83 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	YIPF3	Q9GZM5	350 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	TOR3A	Q9H497	397 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	YAE1D1	Q9NRH1	226 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	DCAF16	Q9NXF7	216 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	ZNF319	Q9P2F9	582 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	COPS3	Q9UNS2	423 aa		12.84	□□□□□ -0.35
ERCC1-217	ENST00000592905	PRR32	B1ATL7	298 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	MLNR	O43193	412 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	CD5L	O43866	347 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	APOL3	O95236	402 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	ADH4	P08319	380 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	TNFSF4	P23510	183 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	RAD23A	P54725	363 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	TMEM33	P57088	247 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	MRPS11	P82912	194 aa	Known RBP	12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	HFE	Q30201	348 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	GFOD2	Q3B7J2	385 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	ZBTB49	Q6ZSB9	765 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	KRT77	Q7Z794	578 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	RFLNB	Q8N5W9	214 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR13G1	Q8NGZ3	307 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	FAM81A	Q8TBF8	368 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	SGK3	Q96BR1	496 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR2V2	Q96R30	315 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	DIRC2	Q96SL1	478 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	MBOAT4	Q96T53	435 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	CNN2	Q99439	309 aa	Known RBP	12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	SLC30A2	Q9BRI3	323 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	REPIN1	Q9BWE0	567 aa	Known RBP	12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	TMEM100	Q9NV29	134 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	AASS	Q9UDR5	926 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	NAV3	Q8IVL0	2385 aa		12.83	□□□□□ -0.36
ERCC1-217	ENST00000592905	SVEP1	Q4LDE5	3571 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	GGT3P	A6NGU5	568 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	SLC22A31	A6NKX4	558 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	CD300LB	A8K4G0	201 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905		F5H5P2	479 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	MAGEB4	O15481	346 aa	Predicted RBP	12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	CD55	P08174	381 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	TACSTD2	P09758	323 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	SELE	P16581	610 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	CHN2	P52757	468 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	CDC42	P60953	191 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	ZNF771	Q7L3S4	317 aa	Predicted RBP	12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	PRSS45	Q7RTY3	260 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	SLC35F2	Q8IXU6	374 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR51G2	Q8NGK0	314 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	EME1	Q96AY2	570 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	PGAM5	Q96HS1	289 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	ADGRL4	Q9HBW9	690 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	LRP12	Q9Y561	859 aa		12.82	□□□□□ -0.36
ERCC1-217	ENST00000592905	ZNF16	P17020	682 aa	Predicted RBP	12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	CA6	P23280	308 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	TIGD6	Q17RP2	521 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	CYB5R2	Q6BCY4	276 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	GID4	Q8IVV7	300 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR8J1	Q8NGP2	316 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	CLDND2	Q8NHS1	167 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	ZNF420	Q8TAQ5	688 aa	Predicted RBP	12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	DVL3	Q92997	716 aa	Predicted RBP	12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	MSI2	Q96DH6	328 aa	Known RBP	12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	REEP6	Q96HR9	211 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	HRASLS5	Q96KN8	279 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	TBX5	Q99593	518 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	IMPAD1	Q9NX62	359 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	IL19	Q9UHD0	177 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	ARHGAP32	A7KAX9	2087 aa		12.81	□□□□□ -0.36
ERCC1-217	ENST00000592905	JMJD1C	Q15652	2540 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	CLDN25	C9JDP6	229 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905		E9PQ18	207 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	XRCC2	O43543	280 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	APOC1	P02654	83 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	SBK2	P0C263	348 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	TNFRSF1A	P19438	455 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	GZMK	P49863	264 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	CXCR4	P61073	352 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	FAM3A	P98173	230 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	GABPB1	Q06547	395 aa	Predicted RBP	12.8	□□□□□ -0.36

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