RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	MED4	Q9NPJ6	270 aa		15.08	■□□□□ 0
CIRBP-238	ENST00000592412	CXCR6	O00574	342 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	CRABP1	P29762	137 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	CENPA	P49450	140 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	TRAP1	Q12931	704 aa	Known RBP	15.07	■□□□□ 0
CIRBP-238	ENST00000592412	OR8G1	Q15617	311 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	CGB2	Q6NT52	195 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	PGM2L1	Q6PCE3	622 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	DPY19L2P2	Q6ZN68	376 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	PGAP1	Q75T13	922 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	FAM90A1	Q86YD7	464 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	GCSAM	Q8N6F7	178 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	PNLDC1	Q8NA58	520 aa	Known RBP	15.07	■□□□□ 0
CIRBP-238	ENST00000592412	FAM110D	Q8TAY7	271 aa	Predicted RBP	15.07	■□□□□ 0
CIRBP-238	ENST00000592412	ATF6B	Q99941	703 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	NDEL1	Q9GZM8	345 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	SEMA6A	Q9H2E6	1030 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	C16orf95	Q9H693	158 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	FN3KRP	Q9HA64	309 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	GID8	Q9NWU2	228 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	KIF17	Q9P2E2	1029 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	ENPP4	Q9Y6X5	453 aa		15.07	■□□□□ 0
CIRBP-238	ENST00000592412	TRBV4-1	A0A0J9YWV2	114 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412		A0A1W2PRQ8	180 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	OOEP	A6NGQ2	149 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	CD300LB	A8K4G0	201 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	ATP8B1	O43520	1251 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	OR10H3	O60404	316 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	SERPINA1	P01009	418 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	GYPA	P02724	150 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	LCAT	P04180	440 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	GGT2	P36268	569 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	ELF3	P78545	371 aa	Predicted RBP	15.06	■□□□□ 0
CIRBP-238	ENST00000592412	LIPE	Q05469	1076 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	SF3A3	Q12874	501 aa	Known RBP eCLIP	15.06	■□□□□ 0	4e-10	■■■□□ 14.7
CIRBP-238	ENST00000592412	DGCR6	Q14129	220 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	OR8B8	Q15620	311 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	SNAI3	Q3KNW1	292 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	ZNF826P	Q6ZT77	177 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	BTN2A1	Q7KYR7	527 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	RRM2B	Q7LG56	351 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	RCN3	Q96D15	328 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	NMNAT3	Q96T66	252 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	PITX2	Q99697	317 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412	ADAT1	Q9BUB4	502 aa	Known RBP	15.06	■□□□□ 0
CIRBP-238	ENST00000592412	SRA1	Q9HD15	236 aa	Known RBP	15.06	■□□□□ 0
CIRBP-238	ENST00000592412	CYB5R1	Q9UHQ9	305 aa		15.06	■□□□□ 0
CIRBP-238	ENST00000592412		A0A1B0GW55	424 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	NME4	O00746	187 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DVL1	O14640	695 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DUX4L2	P0CJ85	424 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DUX4L3	P0CJ86	424 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DUX4L4	P0CJ87	422 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DUX4L5	P0CJ88	424 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DUX4L6	P0CJ89	424 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DUX4L7	P0CJ90	424 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	RPS6KA3	P51812	740 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	ZNF92	Q03936	586 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	POU4F2	Q12837	409 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	MAPRE2	Q15555	327 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	KCNJ8	Q15842	424 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DNM1P34	Q6PK57	102 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DUX4L9	Q6RFH8	374 aa	Predicted RBP	15.05	■□□□□ -0
CIRBP-238	ENST00000592412	FKBP9P1	Q75LS8	142 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	OR2AE1	Q8NHA4	323 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	SPRYD4	Q8WW59	207 aa	Predicted RBP	15.05	■□□□□ -0
CIRBP-238	ENST00000592412	MAP6	Q96JE9	813 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	ERMAP	Q96PL5	475 aa	Predicted RBP	15.05	■□□□□ -0
CIRBP-238	ENST00000592412	FUZ	Q9BT04	418 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	MRPL22	Q9NWU5	206 aa	Known RBP	15.05	■□□□□ -0
CIRBP-238	ENST00000592412	C1orf123	Q9NWV4	160 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	DUX4	Q9UBX2	424 aa		15.05	■□□□□ -0
CIRBP-238	ENST00000592412	TRAV38-1	A0A0B4J264	116 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	UNC119B	A6NIH7	251 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	LHB	P01229	141 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	H1F0	P07305	194 aa	Known RBP	15.04	■□□□□ -0
CIRBP-238	ENST00000592412	PRB3	Q04118	309 aa	Predicted RBP	15.04	■□□□□ -0
CIRBP-238	ENST00000592412	ECH1	Q13011	328 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	MALL	Q13021	153 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	FGD3	Q5JSP0	725 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	HIST2H2BD	Q6DRA6	164 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	SMARCD3	Q6STE5	483 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	GDPGP1	Q6ZNW5	385 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	MRPL21	Q7Z2W9	205 aa	Known RBP	15.04	■□□□□ -0
CIRBP-238	ENST00000592412	VMO1	Q7Z5L0	202 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	ZBTB46	Q86UZ6	589 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	PLPP7	Q8NBV4	271 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	SCCPDH	Q8NBX0	429 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	SLC22A4	Q9H015	551 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	FN3K	Q9H479	309 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	ADA2	Q9NZK5	511 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	NDUFAF4	Q9P032	175 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	ZNRD1	Q9P1U0	126 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	KAAG1	Q9UBP8	84 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	RPUSD1	Q9UJJ7	312 aa	Known RBP	15.04	■□□□□ -0
CIRBP-238	ENST00000592412	ZNF281	Q9Y2X9	895 aa		15.04	■□□□□ -0
CIRBP-238	ENST00000592412	IGHV3OR15-7	A0A075B7D8	119 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412		G3V4G9	280 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412		M0R135	149 aa		15.03	■□□□□ -0
CIRBP-238	ENST00000592412	NDUFA2	O43678	99 aa		15.03	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms