RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	EPHA2	P29317	976 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	OPRL1	P41146	370 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	CX3CR1	P49238	355 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	APOF	Q13790	326 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	KPNB1	Q14974	876 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	SLX4IP	Q5VYV7	408 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	OR2AE1	Q8NHA4	323 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	THEM6	Q8WUY1	208 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	TEAD3	Q99594	435 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	CIB1	Q99828	191 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	REPIN1	Q9BWE0	567 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	ZNF665	Q9H7R5	613 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	GCM1	Q9NP62	436 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	DCAF16	Q9NXF7	216 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	N6AMT1	Q9Y5N5	214 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	ZAR1L	A6NP61	321 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	CD300LB	A8K4G0	201 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	FAM157A	C9JC47	383 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622		F5H5P2	479 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	PRKY	O43930	277 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	H2BFM	P0C1H6	154 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	NAA10	P41227	235 aa	Predicted RBP	13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	SRP9	P49458	86 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	DVL1P1	P54792	670 aa	Predicted RBP	13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	EFNB1	P98172	346 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	HNRNPA0	Q13151	305 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	FAM120AOS	Q5T036	256 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	MEGF10	Q96KG7	1140 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	OPA3	Q9H6K4	179 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	SP140L	Q9H930	580 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	NPTN	Q9Y639	398 aa		13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	YLPM1	P49750	1951 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-233	ENST00000591622	GGT3P	A6NGU5	568 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622		H3BNX3	289 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	IFNL4	K9M1U5	179 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	XRCC2	O43543	280 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	HLA-DPB1	P04440	258 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	ANXA2	P07355	339 aa	Known RBP	13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	MSMB	P08118	114 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	FAM157C	P0CG43	387 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	CR1L	Q2VPA4	569 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	C12orf73	Q69YU5	71 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	ZFP1	Q6P2D0	407 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	SLC16A9	Q7RTY1	509 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	PRSS45	Q7RTY3	260 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	TCEANC	Q8N8B7	351 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	SPSB4	Q96A44	273 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	RAB39B	Q96DA2	213 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	PKP2	Q99959	881 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	GAL3ST1	Q99999	423 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	OSBPL10	Q9BXB5	764 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	KLHDC2	Q9Y2U9	406 aa		13.84	□□□□□ -0.19
CIRBP-233	ENST00000591622	ISPD	A4D126	451 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	CCDC182	A6NF36	153 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	SAC3D1	A6NKF1	404 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622		M0R129	80 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	TBX1	O43435	398 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	IGHV2-70	P01814	119 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	IGHV2-5	P01817	119 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	ANPEP	P15144	967 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	ALOX5AP	P20292	161 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	HNF1A	P20823	631 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	CA6	P23280	308 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	RBMX	P38159	391 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	MMP16	P51512	607 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	HCCS	P53701	268 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	ZNF121	P58317	390 aa	Predicted RBP	13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	LCN1P1	Q5VSP4	162 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	GLCCI1	Q86VQ1	547 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	C10orf67	Q8IYJ2	551 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	CELF2-AS1	Q8N7Q2	184 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	OR52H1	Q8NGJ2	320 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	TMEM163	Q8TC26	289 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	TMEM186	Q96B77	213 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	SGK3	Q96BR1	496 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	SIGLEC11	Q96RL6	698 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	RBM4B	Q9BQ04	359 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	YIPF3	Q9GZM5	350 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	SLC22A4	Q9H015	551 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	LPAR2	Q9HBW0	351 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	DNAJC27	Q9NZQ0	273 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	MRPL15	Q9P015	296 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	LAMP5	Q9UJQ1	280 aa		13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	NOP16	Q9Y3C1	178 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	SON	P18583	2426 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-233	ENST00000591622	IGHV3-64D	A0A0J9YX35	117 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	TMEM178B	H3BS89	294 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	GMDS	O60547	372 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	MRPL3	P09001	348 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	SBK2	P0C263	348 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	PCMT1	P22061	227 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	POLR2I	P36954	125 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	DDOST	P39656	456 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	RAD23A	P54725	363 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	MAB21L1	Q13394	359 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	ZMYND11	Q15326	602 aa		13.82	□□□□□ -0.2
CIRBP-233	ENST00000591622	OR8G1	Q15617	311 aa		13.82	□□□□□ -0.2

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