RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 HAO2Q9NYQ3 351 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 INTS1Q8N201 2190 aaKnown RBP13.01□□□□□ -0.33
RETREG3-208ENST00000589797 C5orf49A4QMS7 147 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 PCNX2A6NKB5 2137 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 OGFOD3Q6PK18 319 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 ADIPOR1Q96A54 375 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 LOC102725191A0A1B0GVB3 256 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 H7C417 338 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 SLC17A2O00624 439 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 OGG1O15527 345 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 PNPP00491 289 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 SELENOPP49908 381 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF616Q08AN1 781 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 PGAP1Q75T13 922 aa13.01□□□□□ -0.33
RETREG3-208ENST00000589797 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
RETREG3-208ENST00000589797 EFSO43281 561 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 IDH3GP51553 393 aaPredicted RBP13□□□□□ -0.33
RETREG3-208ENST00000589797 CFHR1Q03591 330 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 IKZF1Q13422 519 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ST3GAL2Q16842 350 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 LRRTM1Q86UE6 522 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 LIX1LQ8IVB5 337 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 MKXQ8IYA7 352 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 OR11G2Q8NGC1 345 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 OR5M9Q8NGP3 310 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 SECTM1Q8WVN6 248 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ZCCHC4Q9H5U6 513 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 MRPS18AQ9NVS2 196 aaKnown RBP13□□□□□ -0.33
RETREG3-208ENST00000589797 FAM157BP0CG42 384 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ATP1B3P54709 279 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF585AQ6P3V2 769 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF767PQ75MW2 155 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 CCDC28AQ8IWP9 274 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 SGPP2Q8IWX5 399 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 MARCH1Q8TCQ1 289 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF385AQ96PM9 386 aaKnown RBP13□□□□□ -0.33
RETREG3-208ENST00000589797 UBL7Q96S82 380 aaPredicted RBP13□□□□□ -0.33
RETREG3-208ENST00000589797 METTL9Q9H1A3 318 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 OBP2BQ9NPH6 170 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ST6GALNAC2Q9UJ37 374 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 THADAQ6YHU6 1953 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 LMX1BO60663 402 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 DIRAS3O95661 229 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 BGLAPP02818 100 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 OMGP23515 440 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 STARD6P59095 220 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 RIPPLY1Q0D2K3 151 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF774Q6NX45 483 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF574Q6ZN55 896 aaPredicted RBP13□□□□□ -0.33
RETREG3-208ENST00000589797 CCDC36Q8IYA8 594 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 GON7Q9BXV9 100 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 PARP12Q9H0J9 701 aaKnown RBP13□□□□□ -0.33
RETREG3-208ENST00000589797 NTMQ9P121 344 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 HDGFL3Q9Y3E1 203 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 CDH23Q9H251 3354 aa13□□□□□ -0.33
RETREG3-208ENST00000589797 A0A0B4J2A0 478 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF254O75437 659 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ACSM4P0C7M7 580 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ASAH2BP0C7U1 165 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 AVPR2P30518 371 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 MMP15P51511 669 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 AKR1C2P52895 323 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 RAP2BP61225 183 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 TGIF1Q15583 401 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 SUMF1Q8NBK3 374 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 SEMA6DQ8NFY4 1073 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 OR2Y1Q8NGV0 311 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 NPAS1Q99742 590 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 PPP1R3EQ9H7J1 279 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 SHPKQ9UHJ6 478 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 MUC6Q6W4X9 2439 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ANKRD30BLA7E2S9 258 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF587BE7ETH6 402 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 HLA-HP01893 362 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 HPXP02790 462 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 LPLP06858 475 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 PPIAP62937 165 aaKnown RBP12.99□□□□□ -0.33
RETREG3-208ENST00000589797 MEF2DQ14814 521 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ANKRD16Q6P6B7 361 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 PDZD9Q8IXQ8 264 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 DEFB124Q8NES8 71 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 NOXO1Q8NFA2 376 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 DNASE2BQ8WZ79 361 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 APH1AQ96BI3 265 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 EXOSC3Q9NQT5 275 aaKnown RBP12.99□□□□□ -0.33
RETREG3-208ENST00000589797 LIPT2A6NK58 231 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 HS3ST1O14792 307 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 TSPAN2O60636 221 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 RGS11O94810 467 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 VAMP5O95183 116 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 C1QBP02746 253 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 GRPP07492 148 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ZNF687Q8N1G0 1237 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 SAP25Q8TEE9 199 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 RDH5Q92781 318 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ST6GAL2Q96JF0 529 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 FER1L6-AS2Q96M78 137 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 CNTD2Q9H8S5 307 aa12.99□□□□□ -0.33
RETREG3-208ENST00000589797 ASF1BQ9NVP2 202 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms