RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CYB5R1Q9UHQ9 305 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 TMCC3Q9ULS5 477 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 RNF114Q9Y508 228 aa11.6□□□□□ -0.55
VMP1-209ENST00000588915 PRKDCP78527 4128 aaKnown RBP11.59□□□□□ -0.55
VMP1-209ENST00000588915 CD300LBA8K4G0 201 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 NME4O00746 187 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 IDH3BO43837 385 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 MZT1Q08AG7 82 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 OR8G1Q15617 311 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 MPPED2Q15777 294 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 FGD3Q5JSP0 725 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 PRAMEF6Q5VXH4 476 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 ASPHD2Q6ICH7 369 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 MRPL21Q7Z2W9 205 aaKnown RBP11.59□□□□□ -0.55
VMP1-209ENST00000588915 LDLRAD3Q86YD5 345 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 LINC01006Q8NI28 216 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 DHRS1Q96LJ7 313 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 ERMAPQ96PL5 475 aaPredicted RBP11.59□□□□□ -0.55
VMP1-209ENST00000588915 SIRPDQ9H106 197 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 PNRC2Q9NPJ4 139 aaKnown RBP11.59□□□□□ -0.55
VMP1-209ENST00000588915 TNFRSF19Q9NS68 423 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 UFSP2Q9NUQ7 469 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 ARMCX1Q9P291 453 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 KAAG1Q9UBP8 84 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 CTSZQ9UBR2 303 aa11.59□□□□□ -0.55
VMP1-209ENST00000588915 IGHV1-69DA0A0B4J2H0 117 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 TRBV4-1A0A0J9YWV2 114 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 ADAM20O43506 726 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 IGHV1-69P01742 117 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 SFTPBP07988 381 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 CA6P23280 308 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 SLC6A6P31641 620 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 GGT2P36268 569 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 GSK3BP49841 420 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 SLC7A2P52569 658 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 SMIM11AP58511 58 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 TRAP1Q12931 704 aaKnown RBP11.58□□□□□ -0.56
VMP1-209ENST00000588915 TAF9Q16594 264 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 RUSC1-AS1Q66K80 236 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 C8orf82Q6P1X6 216 aaPredicted RBP11.58□□□□□ -0.56
VMP1-209ENST00000588915 HACD2Q6Y1H2 254 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 GDPGP1Q6ZNW5 385 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 CFAP77Q6ZQR2 320 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.58□□□□□ -0.56
VMP1-209ENST00000588915 NAA40Q86UY6 237 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 NPRL2Q8WTW4 380 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 LRTOMTQ8WZ04 291 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 SPTSSAQ969W0 71 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 FAM162AQ96A26 154 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 C7orf34Q96L11 122 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 NMNAT3Q96T66 252 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 RBM4BQ9BQ04 359 aaKnown RBP11.58□□□□□ -0.56
VMP1-209ENST00000588915 FUZQ9BT04 418 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 DPAGT1Q9H3H5 408 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 MMADHCQ9H3L0 296 aaPredicted RBP11.58□□□□□ -0.56
VMP1-209ENST00000588915 EFCAB1Q9HAE3 211 aa11.58□□□□□ -0.56
VMP1-209ENST00000588915 MRPL15Q9P015 296 aaKnown RBP11.58□□□□□ -0.56
VMP1-209ENST00000588915 GMPR2Q9P2T1 348 aaKnown RBP11.58□□□□□ -0.56
VMP1-209ENST00000588915 OOEPA6NGQ2 149 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 M0R135 149 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 GPR137BO60478 399 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 LHBP01229 141 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 COX4I1P13073 169 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 OTX1P32242 354 aaPredicted RBP11.57□□□□□ -0.56
VMP1-209ENST00000588915 IER3P46695 156 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 PROK1P58294 105 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 KRT72Q14CN4 511 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 SEC23BQ15437 767 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 OR8B8Q15620 311 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 SFRP4Q6FHJ7 346 aaPredicted RBP11.57□□□□□ -0.56
VMP1-209ENST00000588915 CGB2Q6NT52 195 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 LINC00346Q8IVM7 164 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 ZSCAN4Q8NAM6 433 aaPredicted RBP11.57□□□□□ -0.56
VMP1-209ENST00000588915 C19orf18Q8NEA5 215 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 UBE2FQ969M7 185 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 ZNF799Q96GE5 643 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 KCTD14Q9BQ13 255 aaPredicted RBP11.57□□□□□ -0.56
VMP1-209ENST00000588915 OR52D1Q9H346 318 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 C16orf95Q9H693 158 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 OPA3Q9H6K4 179 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 CNTD2Q9H8S5 307 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 RPRD1BQ9NQG5 326 aaKnown RBP11.57□□□□□ -0.56
VMP1-209ENST00000588915 DCAF13Q9NV06 445 aaKnown RBP11.57□□□□□ -0.56
VMP1-209ENST00000588915 FGFR1OP2Q9NVK5 253 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 SAMD4AQ9UPU9 718 aaKnown RBP11.57□□□□□ -0.56
VMP1-209ENST00000588915 CAB39Q9Y376 341 aaPredicted RBP11.57□□□□□ -0.56
VMP1-209ENST00000588915 KPTNQ9Y664 436 aa11.57□□□□□ -0.56
VMP1-209ENST00000588915 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.56□□□□□ -0.56
VMP1-209ENST00000588915 SLC22A31A6NKX4 558 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 GPR37O15354 613 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 HIST1H1CP16403 213 aaKnown RBP11.56□□□□□ -0.56
VMP1-209ENST00000588915 ZNF823P16415 610 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 NOS3P29474 1203 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 DDOSTP39656 456 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 KRTAP10-3P60369 221 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 TEX36Q5VZQ5 186 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 METAP1DQ6UB28 335 aaPredicted RBP11.56□□□□□ -0.56
VMP1-209ENST00000588915 DRAM2Q6UX65 266 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 BTN2A1Q7KYR7 527 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 OR4C15Q8NGM1 316 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms