RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 HLXQ14774 488 aaPredicted RBP12.96□□□□□ -0.33
CCDC43-203ENST00000588210 TMEM81Q6P7N7 255 aa12.96□□□□□ -0.33
CCDC43-203ENST00000588210 SLC35D2Q76EJ3 337 aa12.96□□□□□ -0.33
CCDC43-203ENST00000588210 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.96□□□□□ -0.33
CCDC43-203ENST00000588210 SLC25A28Q96A46 364 aa12.96□□□□□ -0.33
CCDC43-203ENST00000588210 TXNIPQ9H3M7 391 aa12.96□□□□□ -0.33
CCDC43-203ENST00000588210 KCNK15Q9H427 330 aa12.96□□□□□ -0.33
CCDC43-203ENST00000588210 DHDHQ9UQ10 334 aa12.96□□□□□ -0.33
CCDC43-203ENST00000588210 SLC22A13Q9Y226 551 aa12.96□□□□□ -0.33
CCDC43-203ENST00000588210 SCO1O75880 301 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 PLGP00747 810 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 SPARCP09486 303 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ACSM4P0C7M7 580 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 CD37P11049 281 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ZNF35P13682 527 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 PPP3CBP16298 524 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 POLR2HP52434 150 aaKnown RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 BAMBIQ13145 260 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 C2orf68Q2NKX9 166 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 TMEM225Q6GV28 225 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 KCTD18Q6PI47 426 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 POMZP3Q6PJE2 187 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 TMUB2Q71RG4 321 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 MARCH3Q86UD3 253 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 CATSPERDQ86XM0 798 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 MUC20Q8N307 709 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 OR51S1Q8NGJ8 323 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 FAM173AQ9BQD7 235 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 REG4Q9BYZ8 158 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 C1orf198Q9H425 327 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 DEPPQ9NTK1 212 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ASF1BQ9NVP2 202 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 RDH8Q9NYR8 311 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 SPEF1Q9Y4P9 236 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 FREM3P0C091 2139 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 C17orf51A8MQB3 221 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 GOSR2O14653 212 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ARPC5O15511 151 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 GMFGO60234 142 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 OR6A2O95222 327 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 IGFBP3P17936 291 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ZP3P21754 424 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 CALCRP30988 508 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 MEOX1P50221 254 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 RIDAP52758 137 aaKnown RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 GPR85P60893 370 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 MFGE8Q08431 387 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 PRR30Q53SZ7 412 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 GLT8D1Q68CQ7 371 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 STEAP1BQ6NZ63 245 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 CDH26Q8IXH8 852 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ZNF454Q8N9F8 522 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ZFP62Q8NB50 900 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 OR2M7Q8NG81 312 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 OR1J4Q8NGS1 313 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 SLC25A36Q96CQ1 311 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 TBL1XR1Q9BZK7 514 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ALX4Q9H161 411 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-203ENST00000588210 ATG5Q9H1Y0 275 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 CKLFQ9UBR5 152 aa12.95□□□□□ -0.34
CCDC43-203ENST00000588210 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 TMED7-TICAM2A0A0A6YYA0 188 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 MFSD2BA6NFX1 497 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 SLC16A7O60669 478 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 CD3DP04234 171 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 CD2P06729 351 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 CTLA4P16410 223 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 TAS2R19P59542 299 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 OR7E24Q6IFN5 339 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 GABRG1Q8N1C3 465 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 TMEM229BQ8NBD8 167 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 SCARB1Q8WTV0 552 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 ASB5Q8WWX0 329 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 SCPEP1Q9HB40 452 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 SDHAF2Q9NX18 166 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 TMED7Q9Y3B3 224 aa12.94□□□□□ -0.34
CCDC43-203ENST00000588210 SLC22A23A1A5C7 686 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 A8MVM7 634 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 WISP1O95388 367 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 SIX6O95475 246 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 NUDT14O95848 222 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 LPLP06858 475 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 NMBP08949 121 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 GABRA1P14867 456 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 ADAM8P78325 824 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 PMP22Q01453 160 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 EIF2B1Q14232 305 aaKnown RBP12.93□□□□□ -0.34
CCDC43-203ENST00000588210 SMUG1Q53HV7 270 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 PRAMEF20Q5VT98 475 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 C1orf140Q5VVS0 124 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 OTPQ5XKR4 325 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
CCDC43-203ENST00000588210 RGS7BPQ6MZT1 257 aaPredicted RBP12.93□□□□□ -0.34
CCDC43-203ENST00000588210 PLPP7Q8NBV4 271 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 OR6M1Q8NGM8 313 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 OR52N5Q8NH56 324 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 TNFAIP8L1Q8WVP5 186 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 DNAJA3Q96EY1 480 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 FOXN4Q96NZ1 517 aa12.93□□□□□ -0.34
CCDC43-203ENST00000588210 ABHD6Q9BV23 337 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms