RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	HPRT1	P00492	218 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	EIF4E	P06730	217 aa	Known RBP	3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	PNMA6A	P0CW24	399 aa	Predicted RBP	3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	RCC1	P18754	421 aa	Predicted RBP	3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	CEACAM6	P40199	344 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	CSK	P41240	450 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	ZNF121	P58317	390 aa	Predicted RBP	3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	HMGCS1	Q01581	520 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	DMTN	Q08495	405 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	PSG7	Q13046	419 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	QPRT	Q15274	297 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	POU2AF1	Q16633	256 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	C5orf64	Q2M2E5	130 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	TPRG1L	Q5T0D9	272 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	LYPD2	Q6UXB3	125 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	WDR82	Q6UXN9	313 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	MRPL55	Q7Z7F7	128 aa	Known RBP	3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	HORMAD1	Q86X24	394 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	ZNF584	Q8IVC4	421 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	FAM71A	Q8IYT1	594 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	CBR4	Q8N4T8	237 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	SPERT	Q8NA61	448 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	OR51E1	Q8TCB6	317 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	SEH1L	Q96EE3	360 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	TM6SF2	Q9BZW4	377 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	LINC00597	Q9H2U6	94 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	UBE2Z	Q9H832	354 aa	Predicted RBP	3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	AGPAT3	Q9NRZ7	376 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	CFAP45	Q9UL16	551 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	RGPD3	A6NKT7	1758 aa	Predicted RBP	3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	RGPD4	Q7Z3J3	1758 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	DCC	P43146	1447 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	ADGRL3	Q9HAR2	1447 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	PLXNC1	O60486	1568 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	SAMD9	Q5K651	1589 aa		3.75	□□□□□ -1.81
TUBD1-208	ENST00000588009	BRCA2	P51587	3418 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	USP9X	Q93008	2570 aa	Predicted RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	MROH7	Q68CQ1	1323 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	GSTTP1	A0A1W2PQM5	241 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	LAD1	O00515	517 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	MPDU1	O75352	247 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	ETHE1	O95571	254 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	FABP3	P05413	133 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	KLK1	P06870	262 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	RET	P07949	1114 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	ZNF19	P17023	458 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	USF1	P22415	310 aa	Predicted RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	WARS	P23381	471 aa	Known RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	CCNE1	P24864	410 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	CEACAM3	P40198	252 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	ZNF138	P52744	262 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	CRISP3	P54108	245 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	VSX2	P58304	361 aa	Predicted RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	YWHAE	P62258	255 aa	Known RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	RCAN2	Q14206	197 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	TMEM255A	Q5JRV8	349 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	C6orf183	Q5T699	404 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	TET2	Q6N021	2002 aa	Predicted RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	SLC35D2	Q76EJ3	337 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	OR2W3	Q7Z3T1	314 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	C6orf120	Q7Z4R8	191 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	ARHGAP18	Q8N392	663 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	FAM86B1	Q8N7N1	296 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	GATS	Q8NAP1	163 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	CHST4	Q8NCG5	386 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	OR6Q1	Q8NGQ2	317 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	NRBF2	Q96F24	287 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	WFIKKN1	Q96NZ8	548 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	ZNF317	Q96PQ6	595 aa	Predicted RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	LZTS2	Q9BRK4	669 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	KIR3DX1	Q9H7L2	352 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	DMAP1	Q9NPF5	467 aa	Predicted RBP	3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	SLC39A1	Q9NY26	324 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	CD84	Q9UIB8	345 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	PSG8	Q9UQ74	426 aa		3.74	□□□□□ -1.81
TUBD1-208	ENST00000588009	RPRD2	Q5VT52	1461 aa	Known RBP	3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	KMT2B	Q9UMN6	2715 aa	Predicted RBP	3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	CENPF	P49454	3210 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	LOC100506127	A0A0U1RQW1	187 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009		A0A1W2PRF3	423 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009		A0A1W2PRM7	423 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009		H3BN98	237 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	PSMD11	O00231	422 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	GABRP	O00591	440 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	POLR1C	O15160	346 aa	Predicted RBP	3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	HOXC4	P09017	264 aa	Predicted RBP	3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	OMG	P23515	440 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	RAB7A	P51149	207 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	FABP6	P51161	128 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	HERVK_113	P61574	105 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	DEFB115	Q30KQ5	88 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009		Q3ZCU0	254 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	LIN9	Q5TKA1	542 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	DNAJC24	Q6P3W2	148 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	UNC93A	Q86WB7	457 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	ARRDC1	Q8N5I2	433 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	DEFB123	Q8N688	67 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	SNX31	Q8N9S9	440 aa		3.73	□□□□□ -1.81
TUBD1-208	ENST00000588009	OR10AD1	Q8NGE0	317 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms