RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NDRG3Q9UGV2 375 aa16.54■□□□□ 0.24
DDX39A-206ENST00000587730 C5orf51A6NDU8 294 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 ZNF878C9JN71 531 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 CCSO14618 274 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 NDUFA2O43678 99 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 DUX1O43812 170 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 PET100P0DJ07 73 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 LAP3P28838 519 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 EMP2P54851 167 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 RNF4P78317 190 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 NAA40Q86UY6 237 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 OR5AP2Q8NGF4 316 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 OR1L3Q8NH93 324 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 C11orf40Q8WZ69 217 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 MRGPRFQ96AM1 343 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 ZNF75AQ96N20 296 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 TGIF2Q9GZN2 237 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 TMEM100Q9NV29 134 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 PCDHB10Q9UN67 800 aa16.53■□□□□ 0.24
DDX39A-206ENST00000587730 TMEM218A2RU14 115 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 SIGLEC6O43699 453 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 FMODQ06828 376 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 DLX2Q07687 328 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-206ENST00000587730 ARL6IP1Q15041 203 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 OR2AJ1Q8NGZ0 328 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 NUBPLQ8TB37 319 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 NUDCD2Q8WVJ2 157 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 DNAJA3Q96EY1 480 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 NARS2Q96I59 477 aaKnown RBP16.52■□□□□ 0.24
DDX39A-206ENST00000587730 MRGPRX4Q96LA9 322 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 SLC39A1Q9NY26 324 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 GHRLQ9UBU3 117 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 SRPK3Q9UPE1 567 aa16.52■□□□□ 0.24
DDX39A-206ENST00000587730 WIPF3A6NGB9 483 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 LIPT2A6NK58 231 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 H2AFB1P0C5Y9 115 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 AKR1C4P17516 323 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 SLC25A53Q5H9E4 307 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 EIF5AL1Q6IS14 154 aaKnown RBP16.52■□□□□ 0.23
DDX39A-206ENST00000587730 DRAM2Q6UX65 266 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 IL34Q6ZMJ4 242 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 KCTD9Q7L273 389 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 ANGPTL5Q86XS5 388 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 BAP18Q8IXM2 172 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 TSTD1Q8NFU3 115 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 OR56B1Q8NGI3 324 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 ADAT3Q96EY9 351 aaPredicted RBP16.52■□□□□ 0.23
DDX39A-206ENST00000587730 TSNAXQ99598 290 aaKnown RBP16.52■□□□□ 0.23
DDX39A-206ENST00000587730 NKX3-1Q99801 234 aaPredicted RBP16.52■□□□□ 0.23
DDX39A-206ENST00000587730 OCSTAMPQ9BR26 566 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 URM1Q9BTM9 101 aaKnown RBP16.52■□□□□ 0.23
DDX39A-206ENST00000587730 SELENOIQ9C0D9 397 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 SERINC1Q9NRX5 453 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 MYEF2Q9P2K5 600 aaKnown RBP16.52■□□□□ 0.23
DDX39A-206ENST00000587730 PRELID3BQ9Y3B1 194 aa16.52■□□□□ 0.23
DDX39A-206ENST00000587730 IGHV1OR15-9A0A0B4J2B8 117 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 ADAM10O14672 748 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 GIMD1P0DJR0 217 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 LYL1P12980 280 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 NR2C1P13056 603 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 AIMP2Q13155 320 aaKnown RBP16.51■□□□□ 0.23
DDX39A-206ENST00000587730 ATXN7L3Q14CW9 347 aaPredicted RBP16.51■□□□□ 0.23
DDX39A-206ENST00000587730 RTL6Q6ICC9 239 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 ATRAIDQ6UW56 229 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 ZNF101Q8IZC7 436 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 SPAG16Q8N0X2 631 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 GVQW1Q8N7I0 195 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 MAFAQ8NHW3 353 aaPredicted RBP16.51■□□□□ 0.23
DDX39A-206ENST00000587730 CASTOR1Q8WTX7 329 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 DCUN1D4Q92564 292 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 RAB3CQ96E17 227 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 NPAS1Q99742 590 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 SDHAF3Q9NRP4 125 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 CTSFQ9UBX1 484 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 SUSD2Q9UGT4 822 aa16.51■□□□□ 0.23
DDX39A-206ENST00000587730 C17orf51A8MQB3 221 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 METTL12A8MUP2 240 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 EEF1E1-BLOC1S5C9J1V9 151 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 LMX1BO60663 402 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 IGHG1P01857 330 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 HIST1H1DP16402 221 aaKnown RBP16.5■□□□□ 0.23
DDX39A-206ENST00000587730 GNB3P16520 340 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 FPR2P25090 351 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 FKBP2P26885 142 aaKnown RBP16.5■□□□□ 0.23
DDX39A-206ENST00000587730 AVPR2P30518 371 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 STK11Q15831 433 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 OR52W1Q6IF63 320 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 CADM4Q8NFZ8 388 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 OR13C9Q8NGT0 318 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 MRPL13Q9BYD1 178 aaKnown RBP16.5■□□□□ 0.23
DDX39A-206ENST00000587730 ASF1BQ9NVP2 202 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 DNAJB11Q9UBS4 358 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 MRPS28Q9Y2Q9 187 aaKnown RBP16.5■□□□□ 0.23
DDX39A-206ENST00000587730 CSAG2Q9Y5P2 127 aa16.5■□□□□ 0.23
DDX39A-206ENST00000587730 IGHV1OR21-1A0A087WYE8 117 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 H7C2Y5 167 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 SSX5O60225 188 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 WISP1O95388 367 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 SFT2D2O95562 160 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 CD79AP11912 226 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms