RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PRR32B1ATL7 298 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 H3BSH0 61 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 SULT1B1O43704 296 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 DHRS3O75911 302 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 LYZL6O75951 148 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 IL18BPO95998 194 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 PNPP00491 289 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 ITGA5P08648 1049 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 ACSM4P0C7M7 580 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 SLC2A1P11166 492 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 COX5AP20674 150 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 CD40LGP29965 261 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 THBS4P35443 961 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 MAP2K3P46734 347 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 TDGF1P3P51864 188 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 SCAND1P57086 179 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 DEFA1P59665 94 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 DEFA3P59666 94 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 PITPNAQ00169 270 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 PSG4Q00888 419 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 IL18Q14116 193 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 LINC00303Q3SY05 128 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 TBRG1Q3YBR2 411 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 CCDC92Q53HC0 331 aaPredicted RBP5.41□□□□□ -1.54
LIG3-206ENST00000586058 UBE2NLQ5JXB2 153 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 ZNF324BQ6AW86 544 aaPredicted RBP5.41□□□□□ -1.54
LIG3-206ENST00000586058 MTFR2Q6P444 385 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 VWA1Q6PCB0 445 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 FAM131AQ6UXB0 335 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 STAC2Q6ZMT1 411 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 TMEM91Q6ZNR0 172 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 LINGO2Q7L985 606 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 BHLHA15Q7RTS1 189 aaPredicted RBP5.41□□□□□ -1.54
LIG3-206ENST00000586058 MRGPRGQ86SM5 289 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 LINC00528Q8N1L1 170 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 JAGN1Q8N5M9 183 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 ST6GALNAC3Q8NDV1 305 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 IL17RDQ8NFM7 739 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 STEAP2Q8NFT2 490 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 OR6M1Q8NGM8 313 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 OR10S1Q8NGN2 331 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 OR6Q1Q8NGQ2 317 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 AKR7LQ8NHP1 331 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 TRMT10AQ8TBZ6 339 aaKnown RBP5.41□□□□□ -1.54
LIG3-206ENST00000586058 TBC1D15Q8TC07 691 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 OR51E1Q8TCB6 317 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 C15orf40Q8WUR7 153 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 RND1Q92730 232 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 ZNF837Q96EG3 531 aaPredicted RBP5.41□□□□□ -1.54
LIG3-206ENST00000586058 TRMT61AQ96FX7 289 aaKnown RBP5.41□□□□□ -1.54
LIG3-206ENST00000586058 REEP6Q96HR9 211 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 DIRAS2Q96HU8 199 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 SLC30A2Q9BRI3 323 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 PRORYQ9H606 182 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 PNRC2Q9NPJ4 139 aaKnown RBP5.41□□□□□ -1.54
LIG3-206ENST00000586058 GPR84Q9NQS5 396 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 PLSCR4Q9NRQ2 329 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 ASF1BQ9NVP2 202 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 KCNN3Q9UGI6 736 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 ETV7Q9Y603 341 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 URB1O60287 2271 aaKnown RBP5.41□□□□□ -1.54
LIG3-206ENST00000586058 ACACAQ13085 2346 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 LOC390937A0A1W2PQ73 354 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 MED19A0JLT2 244 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 GGT3PA6NGU5 568 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 E9PLN8 166 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 AIPO00170 330 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 MSTNO14793 375 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 SRSF10O75494 262 aaKnown RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 NCR1O76036 304 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 SCGNO76038 276 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 HLA-HP01893 362 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 MMP7P09237 267 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 CALCBP10092 127 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 BMP5P22003 454 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 CCL1P22362 96 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 CRYGSP22914 178 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 IGHV1-2P23083 117 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 PTBP1P26599 531 aaKnown RBP eCLIP5.4□□□□□ -1.54
LIG3-206ENST00000586058 APEX1P27695 318 aaKnown RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 HTR2CP28335 458 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 BDKRB2P30411 391 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 OTX1P32242 354 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 KIR2DL2P43627 348 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 BMXP51813 675 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 RPS11P62280 158 aaKnown RBP eCLIP5.4□□□□□ -1.54
LIG3-206ENST00000586058 RIPPLY1Q0D2K3 151 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 INSL4Q14641 139 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 GUSBP1Q15486 140 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 RAB11BQ15907 218 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 HIKESHIQ53FT3 197 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 SFRP5Q5T4F7 317 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 FAM27D1Q5T7N8 215 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 HES5Q5TA89 166 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 TRIQKQ629K1 86 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 METAP1DQ6UB28 335 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 UNQ9370/PRO34162Q6UXP9 181 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 CXorf67Q86X51 503 aaPredicted RBP5.4□□□□□ -1.54
LIG3-206ENST00000586058 C1orf174Q8IYL3 243 aa5.4□□□□□ -1.54
LIG3-206ENST00000586058 PARP16Q8N5Y8 322 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms