RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PLGLB1Q02325 96 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 SPOCK1Q08629 439 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 SCRN3Q0VDG4 424 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 RAB35Q15286 201 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 FAM189A2Q15884 450 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 BCL2A1Q16548 175 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 HYAL4Q2M3T9 481 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 ZFP69Q49AA0 526 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 PHYHD1Q5SRE7 291 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 GLYATL3Q5SZD4 288 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 RAB12Q6IQ22 244 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 ZNF529Q6P280 563 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 GLCCI1Q86VQ1 547 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 TCTE3Q8IZS6 198 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 OR8B12Q8NGG6 310 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 OR56B4Q8NH76 319 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 OR51E1Q8TCB6 317 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 C10orf35Q96D05 121 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 SIGLEC12Q96PQ1 595 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 ATG5Q9H1Y0 275 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 METTL17Q9H7H0 456 aaPredicted RBP9.93□□□□□ -0.82
LIG3-204ENST00000585740 NEK6Q9HC98 313 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 HRASLSQ9HDD0 168 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 ING3Q9NXR8 418 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 FBLN5Q9UBX5 448 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 MTFP1Q9UDX5 166 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 IL17BQ9UHF5 180 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 SLC5A6Q9Y289 635 aa9.93□□□□□ -0.82
LIG3-204ENST00000585740 IGKV3D-15A0A087WSY6 115 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 CIB4A0PJX0 185 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 LDLRAD4O15165 306 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 NME2P1O60361 137 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 SP1P08047 785 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 FTH1P19P0C7X4 201 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 NME2P22392 152 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 PRSS3P35030 304 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 THBS4P35443 961 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 ACTBP60709 375 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 PCBD1P61457 104 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 ACTG1P63261 375 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 NRN1LQ496H8 165 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 CCDC92Q53HC0 331 aaPredicted RBP9.92□□□□□ -0.82
LIG3-204ENST00000585740 IGF2-ASQ6U949 168 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 ZNF813Q6ZN06 617 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 FAM57BQ71RH2 274 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 ABHD12BQ7Z5M8 362 aaPredicted RBP9.92□□□□□ -0.82
LIG3-204ENST00000585740 COMMD2Q86X83 199 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 DTX1Q86Y01 620 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 LYPD6Q86Y78 171 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 SULF2Q8IWU5 870 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 GALNT16Q8N428 558 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 OR51A2Q8NGJ7 313 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 FAM46BQ96A09 425 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 SCMH1Q96GD3 660 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 NUDT16L1Q9BRJ7 211 aaKnown RBP9.92□□□□□ -0.82
LIG3-204ENST00000585740 TRAF4Q9BUZ4 470 aaPredicted RBP9.92□□□□□ -0.82
LIG3-204ENST00000585740 LINC00470Q9BZP3 86 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 SLCO5A1Q9H2Y9 848 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 RNF122Q9H9V4 155 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 GPR84Q9NQS5 396 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 TMEM38BQ9NVV0 291 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 PARPBPQ9NWS1 579 aa9.92□□□□□ -0.82
LIG3-204ENST00000585740 CGGBP1Q9UFW8 167 aaPredicted RBP9.92□□□□□ -0.82
LIG3-204ENST00000585740 ZNF107Q9UII5 783 aaPredicted RBP9.92□□□□□ -0.82
LIG3-204ENST00000585740 TRAV18A0A075B6X5 111 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 OR5H15A6NDH6 313 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 CDRT15L2A8MXV6 281 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 DOK2O60496 412 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 MTRF1O75570 445 aaKnown RBP9.91□□□□□ -0.82
LIG3-204ENST00000585740 ALX3O95076 343 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 IGLV3-1P01715 115 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 MT-ND4P03905 459 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 YES1P07947 543 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 UBBP0CG47 229 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 PSMB1P20618 241 aaKnown RBP9.91□□□□□ -0.82
LIG3-204ENST00000585740 STOMP27105 288 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 OTX1P32242 354 aaPredicted RBP9.91□□□□□ -0.82
LIG3-204ENST00000585740 STARP49675 285 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 GSK3AP49840 483 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 LHX2P50458 406 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 CLDN15P56746 228 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 MAB21L1Q13394 359 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 KCNJ8Q15842 424 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 CD276Q5ZPR3 534 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 DRAM2Q6UX65 266 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 LINC00696Q6ZRV3 163 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 Q6ZSR3 168 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 OR2W3Q7Z3T1 314 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 MDS2Q8NDY4 140 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 ROBO4Q8WZ75 1007 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 ADAT3Q96EY9 351 aaPredicted RBP9.91□□□□□ -0.82
LIG3-204ENST00000585740 ZNF486Q96H40 463 aaPredicted RBP9.91□□□□□ -0.82
LIG3-204ENST00000585740 TTTY12Q9BZ98 90 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 MED28Q9H204 178 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 OR10A2Q9H208 303 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 NUDT15Q9NV35 164 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 PLEK2Q9NYT0 353 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 MCTS1Q9ULC4 181 aaKnown RBP9.91□□□□□ -0.82
LIG3-204ENST00000585740 N6AMT1Q9Y5N5 214 aa9.91□□□□□ -0.82
LIG3-204ENST00000585740 ASH1LQ9NR48 2969 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms