RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 PSMC3IPQ9P2W1 217 aaPredicted RBP2.04□□□□□ -2.08
NLK-206ENST00000584878 TRMT112Q9UI30 125 aaKnown RBP2.04□□□□□ -2.08
NLK-206ENST00000584878 MAPK8IP3Q9UPT6 1336 aa2.04□□□□□ -2.08
NLK-206ENST00000584878 PPIL1Q9Y3C6 166 aa2.04□□□□□ -2.08
NLK-206ENST00000584878 TSPOAP1O95153 1857 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 SMARCA2P51531 1590 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 RAD50Q92878 1312 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 IGLV1-36A0A0B4J1U3 117 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 C5orf63A6NC05 138 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 SMCO2A6NFE2 343 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 GABRR3A8MPY1 467 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 A8MUU9 505 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 RAB29O14966 203 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 NUPL2O15504 423 aaKnown RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 CDRT1O95170 752 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 IGKV1D-16P01601 117 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 HLA-DQA1P01909 254 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 EIF4EP06730 217 aaKnown RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 CRYGBP07316 175 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 ANXA5P08758 320 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 CD3GP09693 182 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 F2RP25116 425 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 GPX4P36969 197 aaPredicted RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 GPR4P46093 362 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 CXCL12P48061 93 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 TMED10P49755 219 aaKnown RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 TSPAN5P62079 268 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 TGM3Q08188 693 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 SASS6Q6UVJ0 657 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 TPGS1Q6ZTW0 290 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 TRMT10CQ7L0Y3 403 aaKnown RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 LRRC6Q86X45 466 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 CDKL3Q8IVW4 592 aaPredicted RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 KATNAL2Q8IYT4 538 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 ASCC1Q8N9N2 400 aaKnown RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 LINC00304Q8N9R0 145 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 SPATA4Q8NEY3 305 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 CDC26Q8NHZ8 85 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 ANGPTL6Q8NI99 470 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 TNFRSF14Q92956 283 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 ZNF707Q96C28 371 aaPredicted RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 CHMP6Q96FZ7 201 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 DUS3LQ96G46 650 aaKnown RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 FRMD8P1Q9BZ68 369 aaPredicted RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 PLA2G12AQ9BZM1 189 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 TSGA10Q9BZW7 698 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 HDHD2Q9H0R4 259 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 OR52A5Q9H2C5 316 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 BLZF1Q9H2G9 400 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 OR52D1Q9H346 318 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 RGCCQ9H4X1 137 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 EDA2RQ9HAV5 297 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 SAMSN1Q9NSI8 373 aaKnown RBP2.03□□□□□ -2.08
NLK-206ENST00000584878 SLC2A8Q9NY64 477 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 IL37Q9NZH6 218 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 DDX19BQ9UMR2 479 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 S4R3C0 116 aa2.03□□□□□ -2.08
NLK-206ENST00000584878 NACADO15069 1562 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 NEURL4Q96JN8 1562 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 SDK2Q58EX2 2172 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 POLR3AO14802 1390 aaPredicted RBP2.02□□□□□ -2.09
NLK-206ENST00000584878 TRAV25A0A0B4J276 109 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 C1orf232A0A0U1RR37 186 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 OR2AG2A6NM03 316 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 SUPT3HB4E1H0 165 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 BPY2O14599 106 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 CHMP2AO43633 222 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 CDH16O75309 829 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 MYO1DO94832 1006 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 SNAI1O95863 264 aaPredicted RBP2.02□□□□□ -2.09
NLK-206ENST00000584878 ACSM4P0C7M7 580 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 OR8U9P0C7N5 309 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 STAG3L2P0CL84 134 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 PTNP21246 168 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 WARSP23381 471 aaKnown RBP2.02□□□□□ -2.09
NLK-206ENST00000584878 DCKP27707 260 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 EVI2BP34910 448 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 SPAM1P38567 509 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 CRATP43155 626 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 CSNK1EP49674 416 aaKnown RBP2.02□□□□□ -2.09
NLK-206ENST00000584878 CDKN2DP55273 166 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 KDSRQ06136 332 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 USF2Q15853 346 aaPredicted RBP2.02□□□□□ -2.09
NLK-206ENST00000584878 RGS21Q2M5E4 152 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 HNRNPA1L2Q32P51 320 aaKnown RBP2.02□□□□□ -2.09
NLK-206ENST00000584878 HIKESHIQ53FT3 197 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 HSP90AA4PQ58FG1 418 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 SAPCD1Q5SSQ6 148 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 HHATQ5VTY9 493 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 TMEM107Q6UX40 140 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 LUZP2Q86TE4 346 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 LRP11Q86VZ4 500 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 LRRC34Q8IZ02 419 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 PRELID2Q8N945 189 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 OR10AD1Q8NGE0 317 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 PHOSPHO2Q8TCD6 241 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 GLYATL2Q8WU03 294 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 TOP1MTQ969P6 601 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 MCUR1Q96AQ8 359 aa2.02□□□□□ -2.09
NLK-206ENST00000584878 KIAA1143Q96AT1 154 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms