RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-234	ENST00000584525	SP140L	Q9H930	580 aa		11.14	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	WDR76	Q9H967	626 aa		11.14	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	HINT3	Q9NQE9	182 aa	Known RBP	11.14	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	G6PC2	Q9NQR9	355 aa		11.14	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PTTG3P	Q9NZH4	202 aa		11.14	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	N6AMT1	Q9Y5N5	214 aa		11.14	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	EI24	O14681	340 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PLPP2	O43688	288 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	NGF	P01138	241 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	LYN	P07948	512 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	H2BFM	P0C1H6	154 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SELE	P16581	610 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ADRA2C	P18825	462 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	GGT2	P36268	569 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	NAA10	P41227	235 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	GRB2	P62993	217 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	HIST1H3A	P68431	136 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	CCL8	P80075	99 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	HIST2H3PS2	Q5TEC6	136 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SLX4IP	Q5VYV7	408 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	MBNL2	Q5VZF2	373 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	HIST2H3A	Q71DI3	136 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	MRPL21	Q7Z2W9	205 aa	Known RBP	11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	DPY19L4	Q7Z388	723 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	C1QL2	Q7Z5L3	287 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	GID4	Q8IVV7	300 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TCEANC	Q8N8B7	351 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	NANP	Q8TBE9	248 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	THEM6	Q8WUY1	208 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PTP4A1	Q93096	173 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	DDO	Q99489	341 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TMPRSS13	Q9BYE2	586 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	EGLN1	Q9GZT9	426 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TOR3A	Q9H497	397 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	LAMP5	Q9UJQ1	280 aa		11.13	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	IGLV3-9	A0A075B6K5	115 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ERICH4	A6NGS2	130 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SLC22A31	A6NKX4	558 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	C17orf100	A8MU93	164 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TBX1	O43435	398 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SPRY3	O43610	288 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	IGHV3-13	P01766	116 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ANXA2	P07355	339 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ATP6V1E1	P36543	226 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	MPV17	P39210	176 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ALDH3A2	P51648	485 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PRKX	P51817	358 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TST	Q16762	297 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TEX30	Q5JUR7	227 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	DCAF12L2	Q5VW00	463 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZBTB49	Q6ZSB9	765 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PQLC1	Q8N2U9	271 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNF454	Q8N9F8	522 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	FAM81A	Q8TBF8	368 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TMEM163	Q8TC26	289 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	RAB39B	Q96DA2	213 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	MARS2	Q96GW9	593 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	MAP6	Q96JE9	813 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	DIRC2	Q96SL1	478 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	CNN2	Q99439	309 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	KCNJ15	Q99712	375 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SAP30L	Q9HAJ7	183 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ESM1	Q9NQ30	184 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	DDX28	Q9NUL7	540 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PCDHGB1	Q9Y5G3	927 aa		11.12	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	IGHV1-69-2	A0A0G2JMI3	117 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZAR1L	A6NP61	321 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525		H3BNX3	289 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525		J3QLI3	93 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PRKY	O43930	277 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SELENOF	O60613	162 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ICMT	O60725	284 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	MRPL3	P09001	348 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	FPR2	P25090	351 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PRR31	Q5SQ13	230 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	KCTD18	Q6PI47	426 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	DRAM2	Q6UX65	266 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PGAP1	Q75T13	922 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	KRT77	Q7Z794	578 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	OR5AS1	Q8N127	324 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	CBR4	Q8N4T8	237 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZDHHC22	Q8N966	263 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNRF4	Q8WWF5	429 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	C22orf15	Q8WYQ4	148 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	RFK	Q969G6	155 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	CMBL	Q96DG6	245 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNF582	Q96NG8	517 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	IL4I1	Q96RQ9	567 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	GABARAPL3	Q9BY60	117 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	C7orf69	Q9H7B7	122 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	USE1	Q9NZ43	259 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	STARD10	Q9Y365	291 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TMEM14A	Q9Y6G1	99 aa		11.11	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SNTN	A6NMZ2	147 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	CLDN25	C9JDP6	229 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TMPRSS2	O15393	492 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ACSM4	P0C7M7	580 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms