RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 BTN2A3PQ96KV6 586 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 ZNF317Q96PQ6 595 aaPredicted RBP1.72□□□□□ -2.13
SKA2-210ENST00000584089 TMEM243Q9BU79 118 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 C1orf50Q9BV19 199 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 ANGPTL4Q9BY76 406 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 PLA2G12AQ9BZM1 189 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 PITPNC1Q9UKF7 332 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 XKRY2A2RUG3 117 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 AP3B1O00203 1094 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 MANBAO00462 879 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 RNF13O43567 381 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 ASGR1P07306 291 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 MYL2P10916 166 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 EIF2S2P20042 333 aaKnown RBP1.71□□□□□ -2.14
SKA2-210ENST00000584089 HTR1DP28221 377 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 POLR2IP36954 125 aaKnown RBP1.71□□□□□ -2.14
SKA2-210ENST00000584089 IDH2P48735 452 aaKnown RBP1.71□□□□□ -2.14
SKA2-210ENST00000584089 CRISP1P54107 249 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 ZNF121P58317 390 aaPredicted RBP1.71□□□□□ -2.14
SKA2-210ENST00000584089 ZNF235Q14590 738 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 HSP90AB3PQ58FF7 597 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 C12orf54Q6X4T0 127 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 CBLN2Q8IUK8 224 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 ZNF664Q8N3J9 261 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 SNX31Q8N9S9 440 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 GPR26Q8NDV2 337 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 OR4C5Q8NGB2 326 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 ZCCHC13Q8WW36 166 aaKnown RBP1.71□□□□□ -2.14
SKA2-210ENST00000584089 HAUS1Q96CS2 278 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 ZFP3Q96NJ6 502 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 SHANK2-AS3Q9BTD1 123 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 SLIRPQ9GZT3 109 aaKnown RBP1.71□□□□□ -2.14
SKA2-210ENST00000584089 TOLLIPQ9H0E2 274 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 CSNK1G1Q9HCP0 422 aa1.71□□□□□ -2.14
SKA2-210ENST00000584089 ZNF230Q9UIE0 474 aaPredicted RBP1.71□□□□□ -2.14
SKA2-210ENST00000584089 BAZ2AQ9UIF9 1905 aaKnown RBP1.71□□□□□ -2.14
SKA2-210ENST00000584089 PCDH11XQ9BZA7 1347 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 SVILO95425 2214 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 A0A1W2PNN7 141 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 GOLGA8OA6NCC3 632 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 GOLGA8NF8WBI6 632 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 CIB2O75838 187 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 LSM8O95777 96 aaKnown RBP1.7□□□□□ -2.14
SKA2-210ENST00000584089 HPRT1P00492 218 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 FTH1P02794 183 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 LGALS3P17931 250 aaKnown RBP1.7□□□□□ -2.14
SKA2-210ENST00000584089 CSNK2A2P19784 350 aaPredicted RBP1.7□□□□□ -2.14
SKA2-210ENST00000584089 NTF3P20783 257 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 MRPL19P49406 292 aaKnown RBP1.7□□□□□ -2.14
SKA2-210ENST00000584089 TAS2R46P59540 309 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 DMC1Q14565 340 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 SLC25A35Q3KQZ1 300 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 PRSS54Q6PEW0 395 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 TMEM136Q6ZRR5 245 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 MDP1Q86V88 176 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 ZNF645Q8N7E2 425 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 C20orf24Q9BUV8 137 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 ANKRA2Q9H9E1 313 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 ZSWIM8A7E2V4 1837 aa1.7□□□□□ -2.14
SKA2-210ENST00000584089 OR6C70A6NIJ9 312 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 CEACAM18A8MTB9 384 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 MFNGO00587 321 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 EIF3HO15372 352 aaKnown RBP eCLIP1.69□□□□□ -2.14
SKA2-210ENST00000584089 NMT2O60551 498 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 HUS1O60921 280 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 SERPINB7O75635 380 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 MT-ND4P03905 459 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 GLAP06280 429 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 RAB4AP20338 218 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 SYKP43405 635 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 LIPEQ05469 1076 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 PRKCDQ05655 676 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 FAM53BQ14153 422 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 KRTAP6-3Q3LI67 103 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 MED27Q6P2C8 311 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 RTL4Q6ZR62 310 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 C19orf18Q8NEA5 215 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 OR9G4Q8NGQ1 327 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 OR1L1Q8NH94 360 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 CPNE4Q96A23 557 aaPredicted RBP1.69□□□□□ -2.14
SKA2-210ENST00000584089 TGS1Q96RS0 853 aaKnown RBP1.69□□□□□ -2.14
SKA2-210ENST00000584089 PLIN2Q99541 437 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 TM2D3Q9BRN9 247 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 ACTR3CQ9C0K3 210 aaPredicted RBP1.69□□□□□ -2.14
SKA2-210ENST00000584089 TMEM38AQ9H6F2 299 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 RETNQ9HD89 108 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 SLC39A1Q9NY26 324 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 HPCAL4Q9UM19 191 aa1.69□□□□□ -2.14
SKA2-210ENST00000584089 IGKV1-27A0A075B6S5 117 aa1.68□□□□□ -2.14
SKA2-210ENST00000584089 LSM1O15116 133 aaKnown RBP1.68□□□□□ -2.14
SKA2-210ENST00000584089 RAD1O60671 282 aa1.68□□□□□ -2.14
SKA2-210ENST00000584089 GATBO75879 557 aaKnown RBP1.68□□□□□ -2.14
SKA2-210ENST00000584089 IGLV6-57P01721 117 aa1.68□□□□□ -2.14
SKA2-210ENST00000584089 RPN2P04844 631 aa1.68□□□□□ -2.14
SKA2-210ENST00000584089 BCKDHBP21953 392 aa1.68□□□□□ -2.14
SKA2-210ENST00000584089 USF1P22415 310 aaPredicted RBP1.68□□□□□ -2.14
SKA2-210ENST00000584089 CD70P32970 193 aa1.68□□□□□ -2.14
SKA2-210ENST00000584089 PFN2P35080 140 aa1.68□□□□□ -2.14
SKA2-210ENST00000584089 NDUFA8P51970 172 aa1.68□□□□□ -2.14
SKA2-210ENST00000584089 HSDL1Q3SXM5 330 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms