RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 HSD11B1P28845 292 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 GRB2P62993 217 aaKnown RBP17.22■□□□□ 0.35
SS18-224ENST00000584083 ZNF92Q03936 586 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 GLYATL3Q5SZD4 288 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 SHFQ7M4L6 423 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 CPOQ8IVL8 374 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 OR5K1Q8NHB7 308 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 ZNF420Q8TAQ5 688 aaPredicted RBP17.22■□□□□ 0.35
SS18-224ENST00000584083 ABHD6Q9BV23 337 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 FBN1P35555 2871 aaKnown RBP17.21■□□□□ 0.35
SS18-224ENST00000584083 C5orf63A6NC05 138 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 CD300LBA8K4G0 201 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 RNF212BA8MTL3 300 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 TMEM178BH3BS89 294 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 THBS2P35442 1172 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 CX3CR1P49238 355 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 MMP16P51512 607 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 RAD23AP54725 363 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 BTG1P62324 171 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 FAHD1Q6P587 224 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 MOGAT3Q86VF5 341 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 TIGD4Q8IY51 512 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 KLHL36Q8N4N3 616 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 SPICQ8N5J4 248 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 SIGLEC11Q96RL6 698 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 TOR3AQ9H497 397 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 MARCH7Q9H992 704 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 SLC25A19Q9HC21 320 aa17.21■□□□□ 0.35
SS18-224ENST00000584083 G3V2T6 193 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 PRODHO43272 600 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 TBX1O43435 398 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 SELENOFO60613 162 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 CIB2O75838 187 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 ANXA2P07355 339 aaKnown RBP17.2■□□□□ 0.34
SS18-224ENST00000584083 CA6P23280 308 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 DAPP51397 102 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 CRISP1P54107 249 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 RPS7P62081 194 aaKnown RBP17.2■□□□□ 0.34
SS18-224ENST00000584083 LCN2P80188 198 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 ZMYND11Q15326 602 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 OR8G1Q15617 311 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 ATP6AP1Q15904 470 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 SNAPC1Q16533 368 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 CXXC5Q7LFL8 322 aaKnown RBP17.2■□□□□ 0.34
SS18-224ENST00000584083 LRRC28Q86X40 367 aaPredicted RBP17.2■□□□□ 0.34
SS18-224ENST00000584083 RNF133Q8WVZ7 376 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 REPIN1Q9BWE0 567 aaKnown RBP17.2■□□□□ 0.34
SS18-224ENST00000584083 TVP23BQ9NYZ1 205 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 NOP16Q9Y3C1 178 aaKnown RBP17.2■□□□□ 0.34
SS18-224ENST00000584083 AP4S1Q9Y587 144 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 MXRA5Q9NR99 2828 aa17.2■□□□□ 0.34
SS18-224ENST00000584083 COL6A5A8TX70 2615 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 A0A0G2JMP0 313 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 A0A0X1KG70 313 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 A0A1B0GWJ7 208 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 LRRC30A6NM36 301 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 CYB5R3P00387 301 aaPredicted RBP17.19■□□□□ 0.34
SS18-224ENST00000584083 PNPP00491 289 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 APOC1P02654 83 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 H2BFMP0C1H6 154 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 ANOS1P23352 680 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 FASP25445 335 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 TMEM155Q4W5P6 130 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 DCAF12L2Q5VW00 463 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.19■□□□□ 0.34
SS18-224ENST00000584083 BBS1Q8NFJ9 593 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 OR4M2Q8NGB6 313 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 THEM6Q8WUY1 208 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 TMEM158Q8WZ71 300 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 AMELYQ99218 206 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 SLC22A4Q9H015 551 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 SP140LQ9H930 580 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 G6PC2Q9NQR9 355 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 DNAJC27Q9NZQ0 273 aa17.19■□□□□ 0.34
SS18-224ENST00000584083 XRCC2O43543 280 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 FOXH1O75593 365 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 ZNF205O95201 554 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 IRF2P14316 349 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 MDH2P40926 338 aaKnown RBP17.18■□□□□ 0.34
SS18-224ENST00000584083 NAA10P41227 235 aaPredicted RBP17.18■□□□□ 0.34
SS18-224ENST00000584083 APOFQ13790 326 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 TIGD6Q17RP2 521 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 SLC35D3Q5M8T2 416 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 FAM57BQ71RH2 274 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 AMIGO2Q86SJ2 522 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 PARP8Q8N3A8 854 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 ZNF454Q8N9F8 522 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 OTOSQ8NHW6 89 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 ADAT1Q9BUB4 502 aaKnown RBP17.18■□□□□ 0.34
SS18-224ENST00000584083 OPA3Q9H6K4 179 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 METTL17Q9H7H0 456 aaPredicted RBP17.18■□□□□ 0.34
SS18-224ENST00000584083 PATZ1Q9HBE1 687 aaKnown RBP17.18■□□□□ 0.34
SS18-224ENST00000584083 BRD7Q9NPI1 651 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 KRT84Q9NSB2 600 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 METRNQ9UJH8 293 aa17.18■□□□□ 0.34
SS18-224ENST00000584083 LYNP07948 512 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 FCGR1AP12314 374 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 OPRL1P41146 370 aa17.17■□□□□ 0.34
SS18-224ENST00000584083 ZNF121P58317 390 aaPredicted RBP17.17■□□□□ 0.34
SS18-224ENST00000584083 ESRRGP62508 458 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms