RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NAA40Q86UY6 237 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 CATSPERDQ86XM0 798 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 CLVS1Q8IUQ0 354 aaPredicted RBP10.06□□□□□ -0.8
CDRT1-207ENST00000583965 OR2G2Q8NGZ5 317 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 RAB2BQ8WUD1 216 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 GATAD2BQ8WXI9 593 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 ITFG2Q969R8 447 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 ISOC1Q96CN7 298 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 PGAM5Q96HS1 289 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 OR10A2Q9H208 303 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 OPA3Q9H6K4 179 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 PLEKHB1Q9UF11 243 aaPredicted RBP10.06□□□□□ -0.8
CDRT1-207ENST00000583965 NUFIP1Q9UHK0 495 aaKnown RBP10.06□□□□□ -0.8
CDRT1-207ENST00000583965 ENPP5Q9UJA9 477 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 OR52A1Q9UKL2 312 aa10.06□□□□□ -0.8
CDRT1-207ENST00000583965 A0A0U1RQV5 110 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 FAM221AA4D161 298 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 VSTM5A8MXK1 200 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 SHISA9B4DS77 424 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 OGG1O15527 345 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 GABARAPO95166 117 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 PNPP00491 289 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 SLC2A1P11166 492 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 CFL1P23528 166 aaKnown RBP10.05□□□□□ -0.8
CDRT1-207ENST00000583965 PSMB9P28065 219 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 GLRXP35754 106 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 TGFBR2P37173 567 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 PSMB10P40306 273 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 PPP1CBP62140 327 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 MFGE8Q08431 387 aaPredicted RBP10.05□□□□□ -0.8
CDRT1-207ENST00000583965 MLLT11Q13015 90 aaPredicted RBP10.05□□□□□ -0.8
CDRT1-207ENST00000583965 MALLQ13021 153 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 SNTB2Q13425 540 aaKnown RBP10.05□□□□□ -0.8
CDRT1-207ENST00000583965 ALKBH1Q13686 389 aaKnown RBP10.05□□□□□ -0.8
CDRT1-207ENST00000583965 MED22Q15528 200 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 CNPY1Q3B7I2 92 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 SNAI3Q3KNW1 292 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 GPR107Q5VW38 600 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 ADAM5Q6NVV9 412 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 RPL22L1Q6P5R6 122 aaKnown RBP10.05□□□□□ -0.8
CDRT1-207ENST00000583965 RFPL4BQ6ZWI9 263 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 FAM57BQ71RH2 274 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 KLBQ86Z14 1044 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 ELMOD2Q8IZ81 293 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 ZNF101Q8IZC7 436 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 OR1J1Q8NGS3 322 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 ABHD4Q8TB40 342 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 RPS4Y2Q8TD47 263 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
CDRT1-207ENST00000583965 FUNDC2Q9BWH2 189 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 PBOV1Q9GZY1 135 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 RGCCQ9H4X1 137 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 ZNF442Q9H7R0 627 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 BRD7Q9NPI1 651 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 G6PC2Q9NQR9 355 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 POU2F3Q9UKI9 436 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 GTF2A1LQ9UNN4 478 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 STARD10Q9Y365 291 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 ATP23Q9Y6H3 246 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 TACC2O95359 2948 aa10.05□□□□□ -0.8
CDRT1-207ENST00000583965 TRBV2A0A0J9YWF9 115 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 TMEM212A6NML5 194 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 TBX1O43435 398 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 NGFP01138 241 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 CD1AP06126 327 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 UBCP0CG48 685 aaKnown RBP10.04□□□□□ -0.8
CDRT1-207ENST00000583965 LIPAP38571 399 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 CDK5R1Q15078 307 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 ZNF718Q3SXZ3 478 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 ZNF672Q499Z4 452 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-207ENST00000583965 ARMCX4Q5H9R4 360 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 WDR38Q5JTN6 314 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 RGS7BPQ6MZT1 257 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-207ENST00000583965 FBXW12Q6X9E4 464 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 ZNF704Q6ZNC4 412 aaPredicted RBP10.04□□□□□ -0.8
CDRT1-207ENST00000583965 SLC16A12Q6ZSM3 486 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 CCDC54Q8NEL0 328 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 KBTBD8Q8NFY9 601 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 OR8B12Q8NGG6 310 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 AKAP1Q92667 903 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDRT1-207ENST00000583965 SPSB4Q96A44 273 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 OPALINQ96PE5 141 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 HS3ST6Q96QI5 342 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 OR5M11Q96RB7 305 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 MGLLQ99685 303 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 COMMD4Q9H0A8 199 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 CA10Q9NS85 328 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 PTTG2Q9NZH5 202 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 FRRS1LQ9P0K9 344 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 ST6GALNAC2Q9UJ37 374 aa10.04□□□□□ -0.8
CDRT1-207ENST00000583965 CCDC160A6NGH7 325 aa10.03□□□□□ -0.8
CDRT1-207ENST00000583965 OR4C45A6NMZ5 311 aa10.03□□□□□ -0.8
CDRT1-207ENST00000583965 E9PI62 339 aa10.03□□□□□ -0.8
CDRT1-207ENST00000583965 H3BMQ9 156 aa10.03□□□□□ -0.8
CDRT1-207ENST00000583965 PLPP2O43688 288 aa10.03□□□□□ -0.8
CDRT1-207ENST00000583965 GPRIN2O60269 458 aa10.03□□□□□ -0.8
CDRT1-207ENST00000583965 NOL3O60936 208 aaKnown RBP10.03□□□□□ -0.8
CDRT1-207ENST00000583965 ATE1O95260 518 aa10.03□□□□□ -0.8
CDRT1-207ENST00000583965 LALBAP00709 142 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms