RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 WDR76Q9H967 626 aa6.5□□□□□ -1.37
PPP4R1-225ENST00000583438 SMURF2Q9HAU4 748 aa6.5□□□□□ -1.37
PPP4R1-225ENST00000583438 CACYBPQ9HB71 228 aaKnown RBP6.5□□□□□ -1.37
PPP4R1-225ENST00000583438 CCNB1IP1Q9NPC3 277 aa6.5□□□□□ -1.37
PPP4R1-225ENST00000583438 ETAA1Q9NY74 926 aa6.5□□□□□ -1.37
PPP4R1-225ENST00000583438 DUX4Q9UBX2 424 aa6.5□□□□□ -1.37
PPP4R1-225ENST00000583438 A4GNTQ9UNA3 340 aa6.5□□□□□ -1.37
PPP4R1-225ENST00000583438 KIR2DS1A0A191URI9 304 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 A0A1W2PRG6 482 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 PLSCR5A0PG75 271 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 GAGE12HA6NDE8 117 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 OR6C6A6NF89 314 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 CENPBD1B2RD01 187 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 G3V4G9 280 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 TNFRSF13BO14836 293 aaPredicted RBP6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 DOK2O60496 412 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 SERPINB7O75635 380 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 NDUFA7O95182 113 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 IGHV4-59P01825 116 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 MDH2P40926 338 aaKnown RBP6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 RAD23AP54725 363 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 SELENOVP59797 346 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 RPL27P61353 136 aaKnown RBP6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 MAB21L1Q13394 359 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 FOXE3Q13461 319 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 TAF11Q15544 211 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 MPPED2Q15777 294 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 MEP1BQ16820 701 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 CYP51A1Q16850 503 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 BEAN1Q3B7T3 259 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 ZNF404Q494X3 552 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 OLFML2AQ68BL7 652 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 OR2T2Q6IF00 324 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 Q6ZPA2 131 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 CCDC80Q76M96 950 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 DPPA2Q7Z7J5 298 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 MOGAT3Q86VF5 341 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 KIRREL3Q8IZU9 778 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 MUC20Q8N307 709 aaPredicted RBP6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 SPICQ8N5J4 248 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 DPP10Q8N608 796 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 TEX29Q8N6K0 151 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 LINC01006Q8NI28 216 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 TMEM239Q8WW34 195 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 RAB40AQ8WXH6 277 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 RASD2Q96D21 266 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 HAVCR1Q96D42 359 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 MPP4Q96JB8 637 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 Q96M85 177 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 EGLN1Q9GZT9 426 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 PTTG3PQ9NZH4 202 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 RHCGQ9UBD6 479 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 IL19Q9UHD0 177 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 RIMS3Q9UJD0 308 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 PPP1R3CQ9UQK1 317 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 SH3GLB1Q9Y371 365 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 DSCAML1Q8TD84 2053 aa6.49□□□□□ -1.37
PPP4R1-225ENST00000583438 CENPVL3A0A0U1RRI6 287 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 H3BSA7 217 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 RER1O15258 196 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 GPR137BO60478 399 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 TGDSO95455 350 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 PTHP01270 115 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 GRPP07492 148 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 PPIAL4GP0DN37 164 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 RPS2P15880 293 aaKnown RBP6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 MSR1P21757 451 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 PPIBP23284 216 aaKnown RBP6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 CFHR2P36980 270 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 PSMB10P40306 273 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 YAP1P46937 504 aaKnown RBP6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 HTR5AP47898 357 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 DAP3P51398 398 aaKnown RBP6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 TAF9Q16594 264 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 KRTAP27-1Q3LI81 207 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 ESCO2Q56NI9 601 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 ALG10Q5BKT4 473 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 PRAMEF6Q5VXH4 476 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 WDR25Q64LD2 544 aaPredicted RBP6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 SLC27A4Q6P1M0 643 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 C1orf94Q6P1W5 598 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 TBPL2Q6SJ96 375 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 RBMS3Q6XE24 437 aaKnown RBP6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 Q6ZSV7 163 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 NAA40Q86UY6 237 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 BHLHE23Q8NDY6 225 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 LRRC8CQ8TDW0 803 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 C7orf26Q96N11 449 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 TSSK2Q96PF2 358 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 GPA33Q99795 319 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 NUDT16L1Q9BRJ7 211 aaKnown RBP6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 CCDC28BQ9BUN5 200 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 SIRPDQ9H106 197 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 LRMDAQ9H2I8 198 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 MMP27Q9H306 513 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 TMBIM4Q9HC24 238 aa6.48□□□□□ -1.37
PPP4R1-225ENST00000583438 TBCCD1Q9NVR7 557 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms