RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 DUS3LQ96G46 650 aaKnown RBP10.21□□□□□ -0.77
TOP3A-215ENST00000583328 TECTBQ96PL2 329 aa10.21□□□□□ -0.77
TOP3A-215ENST00000583328 TBX15Q96SF7 602 aa10.21□□□□□ -0.77
TOP3A-215ENST00000583328 FUZQ9BT04 418 aa10.21□□□□□ -0.77
TOP3A-215ENST00000583328 WACQ9BTA9 647 aa10.21□□□□□ -0.77
TOP3A-215ENST00000583328 KRCC1Q9NPI7 259 aaPredicted RBP10.21□□□□□ -0.77
TOP3A-215ENST00000583328 C20orf141Q9NUB4 165 aa10.21□□□□□ -0.77
TOP3A-215ENST00000583328 TMCC3Q9ULS5 477 aa10.21□□□□□ -0.77
TOP3A-215ENST00000583328 TMEM5Q9Y2B1 443 aa10.21□□□□□ -0.77
TOP3A-215ENST00000583328 LYVE1Q9Y5Y7 322 aa10.21□□□□□ -0.77
TOP3A-215ENST00000583328 IGHV1-69DA0A0B4J2H0 117 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 TNFRSF11BO00300 401 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 SGCEO43556 437 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 FSTL3O95633 263 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 CST1P01037 141 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 SCG5P05408 212 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 PMELP40967 661 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 IER3P46695 156 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 HMGA2P52926 109 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 RPL27P61353 136 aaKnown RBP10.2□□□□□ -0.78
TOP3A-215ENST00000583328 SCRN3Q0VDG4 424 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 ALG10Q5BKT4 473 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 CD276Q5ZPR3 534 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 TBPL2Q6SJ96 375 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 ZNF841Q6ZN19 808 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 DCDC5Q6ZRR9 648 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 FOXL2NBQ6ZUU3 175 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 REC114Q7Z4M0 266 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 C10orf67Q8IYJ2 551 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 LINC00471Q8N535 108 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 SCCPDHQ8NBX0 429 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 MRAPQ8TCY5 172 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 LIPHQ8WWY8 451 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 BPIFA2Q96DR5 249 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 ZNF582Q96NG8 517 aaPredicted RBP10.2□□□□□ -0.78
TOP3A-215ENST00000583328 WDFY2Q96P53 400 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 DPAGT1Q9H3H5 408 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 C16orf95Q9H693 158 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 REEP1Q9H902 201 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 EMC7Q9NPA0 242 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.2□□□□□ -0.78
TOP3A-215ENST00000583328 POLE4Q9NR33 117 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 ARMC1Q9NVT9 282 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 PTTG3PQ9NZH4 202 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 ERVK-18Q9QC07 812 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 NBEAL2Q6ZNJ1 2754 aa10.2□□□□□ -0.78
TOP3A-215ENST00000583328 A0A0U1RQK1 487 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 F5H5P2 479 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 TSPAN19P0C672 248 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 MMP9P14780 707 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 SLC9A3P48764 834 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 NPY4RP50391 375 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 CTXN1P60606 82 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 KPNB1Q14974 876 aaKnown RBP10.19□□□□□ -0.78
TOP3A-215ENST00000583328 SEC23BQ15437 767 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 KPRPQ5T749 579 aaPredicted RBP10.19□□□□□ -0.78
TOP3A-215ENST00000583328 SAMD5Q5TGI4 173 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 METTL11BQ5VVY1 283 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 DHRS7BQ6IAN0 325 aaPredicted RBP10.19□□□□□ -0.78
TOP3A-215ENST00000583328 TMPRSS11FQ6ZWK6 438 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 LDLRAD3Q86YD5 345 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 C19orf18Q8NEA5 215 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 OR5L1Q8NGL2 311 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 OR4C15Q8NGM1 316 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 LRTOMTQ8WZ04 291 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 SLC7A6Q92536 515 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 LHX4Q969G2 390 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 DNAJB9Q9UBS3 223 aa10.19□□□□□ -0.78
TOP3A-215ENST00000583328 SAMHD1Q9Y3Z3 626 aaKnown RBP10.19□□□□□ -0.78
TOP3A-215ENST00000583328 DOCK11Q5JSL3 2073 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 ZNF816-ZNF321PA0A0X1KG74 233 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 ERICH4A6NGS2 130 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 EFCAB9A8MZ26 197 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 GNGT2O14610 69 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 OR10H3O60404 316 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 TIPRLO75663 272 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 OPN1MWP04001 364 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 OPN1MW2P0DN77 364 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 OPN1MW3P0DN78 364 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 FCGR1AP12314 374 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 IFNGR2P38484 337 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 PSMB10P40306 273 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 GPR4P46093 362 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 OMPP47874 163 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 RGS6P49758 472 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 LOXL3P58215 753 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 EGR3Q06889 387 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 ANKDD1AQ495B1 522 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 ZFP1Q6P2D0 407 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 FBXW12Q6X9E4 464 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 IGFN1Q86VF2 1251 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 PDZD9Q8IXQ8 264 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 PNLDC1Q8NA58 520 aaKnown RBP10.18□□□□□ -0.78
TOP3A-215ENST00000583328 OR11L1Q8NGX0 322 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 RASD2Q96D21 266 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 FAM46AQ96IP4 442 aaKnown RBP10.18□□□□□ -0.78
TOP3A-215ENST00000583328 TMEM100Q9NV29 134 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 VNN3Q9NY84 501 aa10.18□□□□□ -0.78
TOP3A-215ENST00000583328 HIF3AQ9Y2N7 669 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms