RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 GLYATL3Q5SZD4 288 aa20.27■□□□□ 0.84
LIMD2-207ENST00000579329 CLDND2Q8NHS1 167 aa20.27■□□□□ 0.84
LIMD2-207ENST00000579329 ITLN1Q8WWA0 313 aa20.27■□□□□ 0.84
LIMD2-207ENST00000579329 MSI2Q96DH6 328 aaKnown RBP20.27■□□□□ 0.84
LIMD2-207ENST00000579329 YIPF3Q9GZM5 350 aa20.27■□□□□ 0.84
LIMD2-207ENST00000579329 OPA3Q9H6K4 179 aa20.27■□□□□ 0.84
LIMD2-207ENST00000579329 NARFLQ9H6Q4 476 aa20.27■□□□□ 0.84
LIMD2-207ENST00000579329 H2AFY2Q9P0M6 372 aaPredicted RBP20.27■□□□□ 0.84
LIMD2-207ENST00000579329 N6AMT1Q9Y5N5 214 aa20.27■□□□□ 0.84
LIMD2-207ENST00000579329 LOC100289279A0A1B0GTE1 492 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 XRCC2O43543 280 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 ANXA2P07355 339 aaKnown RBP20.26■□□□□ 0.83
LIMD2-207ENST00000579329 ANOS1P23352 680 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 EFNB1P98172 346 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 ZNF92Q03936 586 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 AVPI1Q5T686 147 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 NXNL2Q5VZ03 156 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 FAM166AQ6J272 317 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.26■□□□□ 0.83
LIMD2-207ENST00000579329 OR2AE1Q8NHA4 323 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 SPRYD4Q8WW59 207 aaPredicted RBP20.26■□□□□ 0.83
LIMD2-207ENST00000579329 RAB1CQ92928 201 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 OR2V2Q96R30 315 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 S100A14Q9HCY8 104 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 TMEM100Q9NV29 134 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 USE1Q9NZ43 259 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 TREM2Q9NZC2 230 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 LAMP5Q9UJQ1 280 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 WIPI2Q9Y4P8 454 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 ORC6Q9Y5N6 252 aa20.26■□□□□ 0.83
LIMD2-207ENST00000579329 FBN1P35555 2871 aaKnown RBP20.26■□□□□ 0.83
LIMD2-207ENST00000579329 C5orf63A6NC05 138 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 TBX1O43435 398 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 POLR2IP36954 125 aaKnown RBP20.25■□□□□ 0.83
LIMD2-207ENST00000579329 MVKQ03426 396 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 AADACL4Q5VUY2 407 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 MEPCEQ7L2J0 689 aaKnown RBP20.25■□□□□ 0.83
LIMD2-207ENST00000579329 OR10AD1Q8NGE0 317 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 SOX7Q9BT81 388 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 DNAJC27Q9NZQ0 273 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 KCNS2Q9ULS6 477 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 KLHDC2Q9Y2U9 406 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 ANK3Q12955 4377 aaKnown RBP20.25■□□□□ 0.83
LIMD2-207ENST00000579329 TANC2Q9HCD6 1990 aa20.25■□□□□ 0.83
LIMD2-207ENST00000579329 STAB1Q9NY15 2570 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 A0A1B0GWJ7 208 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 GGT3PA6NGU5 568 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 SLC22A31A6NKX4 558 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 CD300LBA8K4G0 201 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 EI24O14681 340 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 WNT9BO14905 357 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 MLNRO43193 412 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 CRLF1O75462 422 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 ALPLP05186 524 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 MRPL3P09001 348 aaKnown RBP20.24■□□□□ 0.83
LIMD2-207ENST00000579329 ALOX5APP20292 161 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 SRP9P49458 86 aaKnown RBP20.24■□□□□ 0.83
LIMD2-207ENST00000579329 ZNF121P58317 390 aaPredicted RBP20.24■□□□□ 0.83
LIMD2-207ENST00000579329 BCDIN3DQ7Z5W3 292 aaKnown RBP20.24■□□□□ 0.83
LIMD2-207ENST00000579329 PEG10Q86TG7 708 aaKnown RBP20.24■□□□□ 0.83
LIMD2-207ENST00000579329 GID4Q8IVV7 300 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 LINC01356Q8N9X3 169 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 C1orf159Q96HA4 380 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 IL4I1Q96RQ9 567 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 CNN2Q99439 309 aaKnown RBP20.24■□□□□ 0.83
LIMD2-207ENST00000579329 NIPAL2Q9H841 368 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 TMEM160Q9NX00 188 aa20.24■□□□□ 0.83
LIMD2-207ENST00000579329 NOP16Q9Y3C1 178 aaKnown RBP20.24■□□□□ 0.83
LIMD2-207ENST00000579329 H0YL77 283 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 LMX1BO60663 402 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 TGFAP01135 160 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 RAD23AP54725 363 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 CDH15P55291 814 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 TIGD6Q17RP2 521 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 FAM57BQ71RH2 274 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 KRT77Q7Z794 578 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 OR52H1Q8NGJ2 320 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 SPATA3Q8NHX4 192 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 SPSB4Q96A44 273 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 MEGF10Q96KG7 1140 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 SLC22A4Q9H015 551 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 TMEM106BQ9NUM4 274 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 PPP1R3CQ9UQK1 317 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 TMEM14AQ9Y6G1 99 aa20.23■□□□□ 0.83
LIMD2-207ENST00000579329 ALDH3A2P51648 485 aa20.22■□□□□ 0.83
LIMD2-207ENST00000579329 KCTD18Q6PI47 426 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-207ENST00000579329 LRRN1Q6UXK5 716 aa20.22■□□□□ 0.83
LIMD2-207ENST00000579329 PRSS45Q7RTY3 260 aa20.22■□□□□ 0.83
LIMD2-207ENST00000579329 PQLC1Q8N2U9 271 aa20.22■□□□□ 0.83
LIMD2-207ENST00000579329 PGAM5Q96HS1 289 aa20.22■□□□□ 0.83
LIMD2-207ENST00000579329 OR10A2Q9H208 303 aa20.22■□□□□ 0.83
LIMD2-207ENST00000579329 SONP18583 2426 aaKnown RBP20.21■□□□□ 0.83
LIMD2-207ENST00000579329 F5H5P2 479 aa20.21■□□□□ 0.83
LIMD2-207ENST00000579329 IFNL4K9M1U5 179 aa20.21■□□□□ 0.83
LIMD2-207ENST00000579329 HLA-DPB1P04440 258 aa20.21■□□□□ 0.83
LIMD2-207ENST00000579329 CFL1P23528 166 aaKnown RBP20.21■□□□□ 0.83
LIMD2-207ENST00000579329 HCCSP53701 268 aa20.21■□□□□ 0.83
LIMD2-207ENST00000579329 PSMA6P60900 246 aaKnown RBP20.21■□□□□ 0.83
LIMD2-207ENST00000579329 CDC42P60953 191 aa20.21■□□□□ 0.83
LIMD2-207ENST00000579329 CBR4Q8N4T8 237 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms