RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 IGHV4-31P0DP07 118 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 TNFSF4P23510 183 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 CHN2P52757 468 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 ZNF121P58317 390 aaPredicted RBP16.37■□□□□ 0.21
SS18-208ENST00000577751 GABPB1Q06547 395 aaPredicted RBP16.37■□□□□ 0.21
SS18-208ENST00000577751 ZSCAN26Q16670 478 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 HFEQ30201 348 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 DEGS2Q6QHC5 323 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.37■□□□□ 0.21
SS18-208ENST00000577751 STMN2Q93045 179 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 ADGRL4Q9HBW9 690 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 COPS3Q9UNS2 423 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 TMEM14AQ9Y6G1 99 aa16.37■□□□□ 0.21
SS18-208ENST00000577751 DYSFO75923 2080 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 LRP5LA4QPB2 252 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 CD300LBA8K4G0 201 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 PPIHO43447 177 aaKnown RBP16.36■□□□□ 0.21
SS18-208ENST00000577751 BAG2O95816 211 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 ANXA2P07355 339 aaKnown RBP16.36■□□□□ 0.21
SS18-208ENST00000577751 CDC42P60953 191 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 ROM1Q03395 351 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 ZIK1Q3SY52 487 aaPredicted RBP16.36■□□□□ 0.21
SS18-208ENST00000577751 LRRN1Q6UXK5 716 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 ZBTB49Q6ZSB9 765 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 BHLHE23Q8NDY6 225 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 OR52H1Q8NGJ2 320 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 HPS1Q92902 700 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 UBE2FQ969M7 185 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 SGK3Q96BR1 496 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 MBOAT4Q96T53 435 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 CNN2Q99439 309 aaKnown RBP16.36■□□□□ 0.21
SS18-208ENST00000577751 MNTQ99583 582 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 OPA3Q9H6K4 179 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 NIPAL2Q9H841 368 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 TMEM100Q9NV29 134 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 DNAJC27Q9NZQ0 273 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 ZNF319Q9P2F9 582 aa16.36■□□□□ 0.21
SS18-208ENST00000577751 WARS2Q9UGM6 360 aaKnown RBP16.36■□□□□ 0.21
SS18-208ENST00000577751 NSD1Q96L73 2696 aaPredicted RBP16.35■□□□□ 0.21
SS18-208ENST00000577751 ZFHX3Q15911 3703 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 PRR32B1ATL7 298 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 H0YL77 283 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 SBK2P0C263 348 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 TNFRSF1AP19438 455 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 HTR1FP30939 366 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 GZMKP49863 264 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 CYB5R2Q6BCY4 276 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 KCTD18Q6PI47 426 aaPredicted RBP16.35■□□□□ 0.21
SS18-208ENST00000577751 FAM57BQ71RH2 274 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 KRT77Q7Z794 578 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 FAM81AQ8TBF8 368 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 ITLN1Q8WWA0 313 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 ASB17Q8WXJ9 295 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 CCL17Q92583 94 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 EME1Q96AY2 570 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 C1orf159Q96HA4 380 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 LRP12Q9Y561 859 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 N6AMT1Q9Y5N5 214 aa16.35■□□□□ 0.21
SS18-208ENST00000577751 CLDN25C9JDP6 229 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 ANKRD65E5RJM6 399 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 WNT9BO14905 357 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 ZNF254O75437 659 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 IL2RGP31785 369 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 DCTDP32321 178 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 RIPPLY3P57055 190 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 PSMA6P60900 246 aaKnown RBP16.34■□□□□ 0.21
SS18-208ENST00000577751 FAM3AP98173 230 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 TMED1Q13445 227 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 SLC25A30Q5SVS4 291 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 C6orf52Q5T4I8 152 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 ZNF679Q8IYX0 411 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 OR10AD1Q8NGE0 317 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 SPRYD4Q8WW59 207 aaPredicted RBP16.34■□□□□ 0.21
SS18-208ENST00000577751 OR2V2Q96R30 315 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 OR8B4Q96RC9 309 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 SOX7Q9BT81 388 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 CLN6Q9NWW5 311 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 TREM2Q9NZC2 230 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 FN1P02751 2386 aaKnown RBP16.34■□□□□ 0.21
SS18-208ENST00000577751 HIVEP2P31629 2446 aa16.34■□□□□ 0.21
SS18-208ENST00000577751 GGT3PA6NGU5 568 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 TBX1O43435 398 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 HOXB4P17483 251 aaPredicted RBP16.33■□□□□ 0.2
SS18-208ENST00000577751 DDOSTP39656 456 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 SNRPGP62308 76 aaKnown RBP16.33■□□□□ 0.2
SS18-208ENST00000577751 SLC3A1Q07837 685 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 TIGD6Q17RP2 521 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 SLC35F2Q8IXU6 374 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 RFLNBQ8N5W9 214 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 OR51G2Q8NGK0 314 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 CLDND2Q8NHS1 167 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 RFKQ969G6 155 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 MSI2Q96DH6 328 aaKnown RBP16.33■□□□□ 0.2
SS18-208ENST00000577751 REEP6Q96HR9 211 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 MEGF10Q96KG7 1140 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 MROQ9BYG7 248 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 SLC22A4Q9H015 551 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 OR10A2Q9H208 303 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 RGCCQ9H4X1 137 aa16.33■□□□□ 0.2
SS18-208ENST00000577751 GCM1Q9NP62 436 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms