RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SPSB4Q96A44 273 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF799Q96GE5 643 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MS4A3Q96HJ5 214 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 C4orf45Q96LM5 186 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DOK1Q99704 481 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TMEM204Q9BSN7 226 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 LIME1Q9H400 295 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 G6PC2Q9NQR9 355 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NUFIP1Q9UHK0 495 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF391Q9UJN7 358 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SNX5Q9Y5X3 404 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 IGHV2OR16-5A0A0B4J2B6 119 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 C5orf49A4QMS7 147 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PSMD9O00233 223 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MYL12BO14950 172 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 LALBAP00709 142 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TFAP2AP05549 437 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DBHP09172 617 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NR4A1P22736 598 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 HSD11B1P28845 292 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RAD52P43351 418 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 KIR2DL3P43628 341 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 IDH3GP51553 393 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NR1H2P55055 460 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 UCP2P55851 309 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NKX6-1P78426 367 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 HGFACQ04756 655 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MLLT11Q13015 90 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DOC2BQ14184 412 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TAF13Q15543 124 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TP53I3Q53FA7 332 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 BEX5Q5H9J7 111 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 KCTD8Q6ZWB6 473 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF367Q7RTV3 350 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 FAM220AQ7Z4H9 259 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NAA40Q86UY6 237 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ELMOD2Q8IZ81 293 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 YIPF7Q8N8F6 280 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PLPP7Q8NBV4 271 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NUP37Q8NFH4 326 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OR2G2Q8NGZ5 317 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SLC7A6Q92536 515 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 APOBEC3DQ96AK3 386 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OR5M11Q96RB7 305 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MGLLQ99685 303 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MRPS26Q9BYN8 205 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CCDC90BQ9GZT6 254 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RGCCQ9H4X1 137 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ESRP2Q9H6T0 727 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TRIM36Q9NQ86 728 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ACOXLQ9NUZ1 547 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 FRRS1LQ9P0K9 344 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 GNG8Q9UK08 70 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 IKZF2Q9UKS7 526 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 EDARQ9UNE0 448 aa9.6□□□□□ -0.87
CDK5RAP3-204ENST00000577664 LOC390937A0A1W2PQ73 354 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OR4C45A6NMZ5 311 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DEFB108AA8MXU0 73 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 E9PI62 339 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 F5H5K5 113 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 H3BSA7 217 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CASKO14936 926 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CRYAAP02489 173 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CPEP16870 476 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CCL1P22362 96 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CALCRP30988 508 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 GLRXP35754 106 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 WNT5AP41221 380 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MAP2K4P45985 399 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ALDH3B2P48448 385 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CX3CR1P49238 355 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF83P51522 516 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF121P58317 390 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NANOS3P60323 173 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 GALK2Q01415 458 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ALKBH1Q13686 389 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CDK5R1Q15078 307 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ADAM5Q6NVV9 412 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 KRTAP1-3Q8IUG1 177 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PRSS35Q8N3Z0 413 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PAQR4Q8N4S7 273 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CCDC54Q8NEL0 328 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MUL1Q969V5 352 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SMIM19Q96E16 107 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 COX4I2Q96KJ9 171 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 C1QTNF6Q9BXI9 259 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 BCL2L14Q9BZR8 327 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CRIM1Q9NZV1 1036 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF319Q9P2F9 582 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 EIF3KQ9UBQ5 218 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OR52A1Q9UKL2 312 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SIRT4Q9Y6E7 314 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZANQ9Y493 2812 aa9.59□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ANK3Q12955 4377 aaKnown RBP9.59□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TMEM212A6NML5 194 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 INAFM1C9JVW0 142 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 M0R1B8 84 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SIAH2O43255 324 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 XRCC2O43543 280 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GPRIN2O60269 458 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms