RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 ZFP3Q96NJ6 502 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 HS3ST6Q96QI5 342 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 PDCD1LG2Q9BQ51 273 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 OPN3Q9H1Y3 402 aaPredicted RBP8.88□□□□□ -0.99
SS18-207ENST00000577636 MOB1AQ9H8S9 216 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 RNF122Q9H9V4 155 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 TCF7L1Q9HCS4 588 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 EMC7Q9NPA0 242 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 ASH2LQ9UBL3 628 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 CMAHPQ9Y471 501 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 ZNF175Q9Y473 711 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 R4GMQ9 66 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 PMF1-BGLAPU3KQ54 211 aa8.88□□□□□ -0.99
SS18-207ENST00000577636 IGKV1D-43A0A0B4J1Z2 117 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 TMEM269A0A1B0GVZ9 245 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 SLC22A20A6NK97 555 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 ZNF724A8MTY0 619 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 PRR32B1ATL7 298 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 TMEM127O75204 238 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 SC5DO75845 299 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 FARS2O95363 451 aaKnown RBP8.87□□□□□ -0.99
SS18-207ENST00000577636 TGM6O95932 706 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 YES1P07947 543 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 UCHL1P09936 223 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 UBCP0CG48 685 aaKnown RBP8.87□□□□□ -0.99
SS18-207ENST00000577636 CRYGSP22914 178 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 CD40LGP29965 261 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 CDAP32320 146 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 NANOS3P60323 173 aaKnown RBP8.87□□□□□ -0.99
SS18-207ENST00000577636 TNK1Q13470 666 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 TMEM244Q5VVB8 128 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 VWA1Q6PCB0 445 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 C20orf204Q6ZNR8 217 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 ABHD12BQ7Z5M8 362 aaPredicted RBP8.87□□□□□ -0.99
SS18-207ENST00000577636 ZNF100Q8IYN0 542 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 RPS4Y2Q8TD47 263 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 ST7LQ8TDW4 575 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 ABHD3Q8WU67 409 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 TMEM171Q8WVE6 324 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 APH1AQ96BI3 265 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 ZNF775Q96BV0 537 aaPredicted RBP8.87□□□□□ -0.99
SS18-207ENST00000577636 STARD4Q96DR4 205 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 OR14A2Q96R54 314 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 AMELYQ99218 206 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 SLC30A2Q9BRI3 323 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 WACQ9BTA9 647 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 MRI1Q9BV20 369 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 GSX2Q9BZM3 304 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 SLCO5A1Q9H2Y9 848 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 SP140LQ9H930 580 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 GP6Q9HCN6 339 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 AKIP1Q9NQ31 210 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 GDF2Q9UK05 429 aaPredicted RBP8.87□□□□□ -0.99
SS18-207ENST00000577636 DHDHQ9UQ10 334 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 EMC9Q9Y3B6 208 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 MED12Q93074 2177 aa8.87□□□□□ -0.99
SS18-207ENST00000577636 DOCK7Q96N67 2140 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 FBN1P35555 2871 aaKnown RBP8.86□□□□□ -0.99
SS18-207ENST00000577636 OR4C45A6NMZ5 311 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 ZNF587BE7ETH6 402 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 MSTNO14793 375 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 TNFSF13O75888 250 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 CLEC2LP0C7M8 214 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 BMP4P12644 408 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 SRMP19623 302 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 TALDO1P37837 337 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 MMP16P51512 607 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 PPP5CP53041 499 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 ATP5J2P56134 94 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 SCRN3Q0VDG4 424 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 ECH1Q13011 328 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 INSL4Q14641 139 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 STK11Q15831 433 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 WDR38Q5JTN6 314 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 IDNKQ5T6J7 187 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 FAM27BQ5VT28 67 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 OTPQ5XKR4 325 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 ALKBH2Q6NS38 261 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 CORO6Q6QEF8 472 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 ZNF474Q6S9Z5 364 aaPredicted RBP8.86□□□□□ -0.99
SS18-207ENST00000577636 UNQ9370/PRO34162Q6UXP9 181 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 FOXL2NBQ6ZUU3 175 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 BTLAQ7Z6A9 289 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 CATSPERDQ86XM0 798 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 WDFY1Q8IWB7 410 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 OR13C5Q8NGS8 318 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 FNDC9Q8TBE3 224 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 HSD17B8Q92506 261 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 SPTSSAQ969W0 71 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 MAP6Q96JE9 813 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 DCLRE1CQ96SD1 692 aaKnown RBP8.86□□□□□ -0.99
SS18-207ENST00000577636 BARHL1Q9BZE3 327 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 LINC00470Q9BZP3 86 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 CRLF2Q9HC73 371 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 NOX4Q9NPH5 578 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 GLRX2Q9NS18 164 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 CLCF1Q9UBD9 225 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 COMMD3Q9UBI1 195 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms