RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 ALLCQ8N6M5 410 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 OR51G2Q8NGK0 314 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 OR5D18Q8NGL1 313 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 OR5M1Q8NGP8 315 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 OR10Z1Q8NGY1 313 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 SETD7Q8WTS6 366 aaKnown RBP3.5□□□□□ -1.85
NUP88-213ENST00000576862 RNF133Q8WVZ7 376 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 DNAJB3Q8WWF6 145 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 FAM3CQ92520 227 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 TADA1Q96BN2 335 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 TMEM80Q96HE8 168 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 CELF6Q96J87 481 aaKnown RBP3.5□□□□□ -1.85
NUP88-213ENST00000576862 MS4A14Q96JA4 679 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 JSRP1Q96MG2 331 aaPredicted RBP3.5□□□□□ -1.85
NUP88-213ENST00000576862 NOL4LQ96MY1 436 aaPredicted RBP3.5□□□□□ -1.85
NUP88-213ENST00000576862 P2RY13Q9BPV8 354 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 SLC22A4Q9H015 551 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 BATF3Q9NR55 127 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 ZNF282Q9UDV7 671 aaPredicted RBP3.5□□□□□ -1.85
NUP88-213ENST00000576862 PRO0461Q9UI25 63 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 GINS2Q9Y248 185 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 RNF6Q9Y252 685 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 STARD10Q9Y365 291 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 HYOU1Q9Y4L1 999 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 URGCP-MRPS24S4R325 110 aa3.5□□□□□ -1.85
NUP88-213ENST00000576862 MROH7Q68CQ1 1323 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 PTPRFP10586 1907 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 A0A1B0GW15 77 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 FUOMA2VDF0 154 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 ZNF99A8MXY4 864 aaPredicted RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 E9PLD3 99 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 H3BTX0 84 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 K7ENP7 123 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 RTL8CO15255 209 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 ZNF861PO60384 105 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 SMIM24O75264 130 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 SCRG1O75711 98 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 CLDN9O95484 217 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 ETHE1O95571 254 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 IGLV1-47P01700 117 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 TNNC2P02585 160 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 TCP1P17987 556 aaKnown RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 TSPAN8P19075 237 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 UGT1A5P35504 534 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 RPL4P36578 427 aaKnown RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 CAPZBP47756 277 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 UQCRFS1P47985 274 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 MARCKSL1P49006 195 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 RPL14P50914 215 aaKnown RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 PSMD4P55036 377 aaKnown RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 ATP5J2P56134 94 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 WNT4P56705 351 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 OR2B6P58173 313 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 RAB10P61026 200 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 CXCR4P61073 352 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 ZNF33AQ06730 810 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 C2orf54Q08AI8 447 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 ZNF154Q13106 437 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 TMED2Q15363 201 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 KLHL38Q2WGJ6 581 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 OR2B11Q5JQS5 317 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 FAM120AOSQ5T036 256 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 IGFL2Q6UWQ7 119 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 CD300LGQ6UXG3 332 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 TMPRSS11AQ6ZMR5 421 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 Q7L0L9 218 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 DPY19L4Q7Z388 723 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 NT5DC3Q86UY8 548 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 SERPINA9Q86WD7 417 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 MMAAQ8IVH4 418 aaKnown RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 ZNF100Q8IYN0 542 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 CMTM8Q8IZV2 173 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 SYS1Q8N2H4 156 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 BPIFB2Q8N4F0 458 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 TRAM1L1Q8N609 369 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 TTC29Q8NA56 475 aaPredicted RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 OR4D5Q8NGN0 318 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 DTD1Q8TEA8 209 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 NTAN1Q96AB6 310 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 PPP1R36Q96LQ0 422 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 ZNF285Q96NJ3 590 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 AMDHD1Q96NU7 426 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 TRIM4Q9C037 500 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 PIGUQ9H490 435 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 ASB7Q9H672 318 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 LPAR2Q9HBW0 351 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 C12orf4Q9NQ89 552 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 CISHQ9NSE2 258 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 MRM2Q9UI43 246 aaKnown RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 ZNF221Q9UK13 617 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 SLC22A13Q9Y226 551 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 GSTK1Q9Y2Q3 226 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 PRG3Q9Y2Y8 225 aaPredicted RBP3.49□□□□□ -1.85
NUP88-213ENST00000576862 HES2Q9Y543 173 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 KPTNQ9Y664 436 aa3.49□□□□□ -1.85
NUP88-213ENST00000576862 EFCAB10A6NFE3 127 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 SAGE2PA6NJ88 616 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 TEX46H3BTG2 121 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 DLGAP1O14490 977 aa3.48□□□□□ -1.85
NUP88-213ENST00000576862 RFXANKO14593 260 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms