RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 LOC102725191A0A1B0GVB3 256 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 AKR7A3O95154 331 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 CRHP06850 196 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 MR1Q95460 341 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 MAP3K3Q99759 626 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 CHST6Q9GZX3 395 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 GPR84Q9NQS5 396 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 PIAS3Q9Y6X2 628 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 HLA-HP01893 362 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR5H8P0DN80 308 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 HOXB9P17482 250 aaPredicted RBP11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 AADACP22760 399 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 CALCRP30988 508 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 PLGLB1Q02325 96 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 COL16A1Q07092 1604 aaPredicted RBP11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 IKZF1Q13422 519 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 PCK2Q16822 640 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 KCNK15Q9H427 330 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 MMP25Q9NPA2 562 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 CTSFQ9UBX1 484 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 MRM2Q9UI43 246 aaKnown RBP11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 LRP12Q9Y561 859 aa11.84□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF727A8MUV8 499 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 SYNGR4O95473 234 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 VSIG10L2P0DP72 767 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 OPRM1P35372 400 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 GRB2P62993 217 aaKnown RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 BTG2P78543 158 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 HSF1Q00613 529 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 C9orf152Q5JTZ5 239 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 DCAF12L2Q5VW00 463 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 ARHGEF39Q8N4T4 335 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 BAHD1Q8TBE0 780 aaPredicted RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 TVP23CQ96ET8 276 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 HINT2Q9BX68 163 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 PBOV1Q9GZY1 135 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 PLK3Q9H4B4 646 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 ST6GALNAC2Q9UJ37 374 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 PIGLQ9Y2B2 252 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 MMACHCQ9Y4U1 282 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 A6NLC8 198 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 SFT2D2O95562 160 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 PPICP45877 212 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 ELAVL1Q15717 326 aaKnown RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 AADACL3Q5VUY0 350 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 RPL7L1Q6DKI1 246 aaKnown RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 TSEN54Q7Z6J9 526 aaKnown RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 PUSL1Q8N0Z8 303 aaKnown RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 ANKRD9Q96BM1 317 aaPredicted RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 MOB1AQ9H8S9 216 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 DNAJB12Q9NXW2 375 aaKnown RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 DNAJB11Q9UBS4 358 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 RARRES3Q9UL19 164 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 GJE1A6NN92 205 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 PSMB3P49720 205 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 GUCA2BQ16661 112 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 NT5CQ8TCD5 201 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 RTN4IP1Q8WWV3 396 aaPredicted RBP11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 WFDC6Q9BQY6 131 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 EDEM2Q9BV94 578 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 SLC35B3Q9H1N7 401 aa11.83□□□□□ -0.52
PCDHGB3-201ENST00000576222 FABP4P15090 132 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 FPR2P25090 351 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 PIGPP57054 158 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 NCMAPQ5T1S8 102 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 OR4C3Q8NH37 302 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 TEX101Q9BY14 249 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 POMT1Q9Y6A1 747 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 A0A1W2PPH5 198 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 TRAPPC2LH3BP13 241 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 OLFM2O95897 454 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 CEACAM5P06731 702 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 TMIGD3P0DMS9 266 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 HOXB3P14651 431 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 RAB31Q13636 194 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 MSMO1Q15800 293 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 PNLIPRP3Q17RR3 467 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 UBE3DQ7Z6J8 389 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 SLC37A2Q8TED4 501 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 PSMF1Q92530 271 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 KTI12Q96EK9 354 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 NRTNQ99748 197 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 SHARPINQ9H0F6 387 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 DHCR7Q9UBM7 475 aaKnown RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 GDF2Q9UK05 429 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 COL5A3P25940 1745 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 TRBV11-1A0A0K0K1C0 115 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 CCR2P41597 374 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 HTR5AP47898 357 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 AWAT1Q58HT5 328 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 TMEM31Q5JXX7 168 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 GVQW1Q8N7I0 195 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 ZNF611Q8N823 705 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 GJC3Q8NFK1 279 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 FRRS1LQ9P0K9 344 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 LPAR3Q9UBY5 353 aa11.82□□□□□ -0.52
PCDHGB3-201ENST00000576222 CHRNA9Q9UGM1 479 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms