RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SLC36A1Q7Z2H8 476 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 MRPL21Q7Z2W9 205 aaKnown RBP7.39□□□□□ -1.23
SMG6-218ENST00000575454 MICU2Q8IYU8 434 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 LY6G5BQ8NDX9 201 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 OR4F17Q8NGA8 305 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 OR13C2Q8NGS9 318 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 ACOT11Q8WXI4 607 aaPredicted RBP7.39□□□□□ -1.23
SMG6-218ENST00000575454 CLPTM1LQ96KA5 538 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 Q96M85 177 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 OR4F4Q96R69 305 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 EBF4Q9BQW3 602 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 ADAT1Q9BUB4 502 aaKnown RBP7.39□□□□□ -1.23
SMG6-218ENST00000575454 SYT4Q9H2B2 425 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 AURKAIP1Q9NWT8 199 aaPredicted RBP7.39□□□□□ -1.23
SMG6-218ENST00000575454 C1orf123Q9NWV4 160 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 MRPL15Q9P015 296 aaKnown RBP7.39□□□□□ -1.23
SMG6-218ENST00000575454 A4GNTQ9UNA3 340 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 ADAM18Q9Y3Q7 739 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 MAB21L2Q9Y586 359 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 DNAH3Q8TD57 4116 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 ARHGAP32A7KAX9 2087 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 RYR2Q92736 4967 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 MEIOCA2RUB1 952 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 CD300LBA8K4G0 201 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 F5H5K5 113 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 NDUFB3O43676 98 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 NDUFB2O95178 105 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 ACSM4P0C7M7 580 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 MDH1P40925 334 aaKnown RBP7.38□□□□□ -1.23
SMG6-218ENST00000575454 CENPAP49450 140 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 TPTEP56180 551 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 MAGOHP61326 146 aaKnown RBP7.38□□□□□ -1.23
SMG6-218ENST00000575454 KRR1Q13601 381 aaKnown RBP7.38□□□□□ -1.23
SMG6-218ENST00000575454 AANATQ16613 207 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 KRTAP27-1Q3LI81 207 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 SLC36A3Q495N2 470 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 CYBRD1Q53TN4 286 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 PGBD2Q6P3X8 592 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 ZNF730Q6ZMV8 503 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 LIAT1Q6ZQX7 453 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 MBOAT2Q6ZWT7 520 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 FAM122BQ7Z309 247 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 CALHM3Q86XJ0 350 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 FAM90A1Q86YD7 464 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 OFCC1Q8IZS5 231 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 KLHDC1Q8N7A1 406 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 BEND2Q8NDZ0 799 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 OR8J3Q8NGG0 315 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 OR2AJ1Q8NGZ0 328 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 STON2Q8WXE9 905 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 SPTSSAQ969W0 71 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 C12orf43Q96C57 262 aaKnown RBP7.38□□□□□ -1.23
SMG6-218ENST00000575454 PITX2Q99697 317 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 NPFFR1Q9GZQ6 430 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 NUAK2Q9H093 628 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 RNPEPL1Q9HAU8 725 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 NRIP3Q9NQ35 241 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 RPS6KA6Q9UK32 745 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 TMEM5Q9Y2B1 443 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 LHFPL6Q9Y693 200 aa7.38□□□□□ -1.23
SMG6-218ENST00000575454 hCG_1807616A0A1W2PRN6 198 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 GGT3PA6NGU5 568 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 A6NLC8 198 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 PPP1R3DO95685 299 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 NPPAP01160 153 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 LHBP01229 141 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 IFNW1P05000 195 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 GRPP07492 148 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 VSIG10L2P0DP72 767 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 FAHP16930 419 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 PAICSP22234 425 aaKnown RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 KDELR2P33947 212 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 SAA4P35542 130 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 GGT2P36268 569 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 NAA10P41227 235 aaPredicted RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 RPS6KA3P51812 740 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 SELENOWP63302 87 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 TRAP1Q12931 704 aaKnown RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 BLMHQ13867 455 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 RSPO1Q2MKA7 263 aaPredicted RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 LRRC10Q5BKY1 277 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 NANOGP8Q6NSW7 305 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 DPY19L2P2Q6ZN68 376 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 TSEN54Q7Z6J9 526 aaKnown RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 GCSAMQ8N6F7 178 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 C11orf44Q8N8P7 122 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 TPD52L3Q96J77 140 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 GPX7Q96SL4 187 aaPredicted RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 ATF6BQ99941 703 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 OCSTAMPQ9BR26 566 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 PARD6BQ9BYG5 372 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 SEMA6AQ9H2E6 1030 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 ANKRD19PQ9H560 264 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 OPA3Q9H6K4 179 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 METTL8Q9H825 291 aaKnown RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 SIRT7Q9NRC8 400 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 MRGBPQ9NV56 204 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 PRPF19Q9UMS4 504 aaKnown RBP7.37□□□□□ -1.23
SMG6-218ENST00000575454 FOXJ3Q9UPW0 622 aa7.37□□□□□ -1.23
SMG6-218ENST00000575454 SIGLEC9Q9Y336 463 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms