RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SLC2A14Q8TDB8 520 aa1.91□□□□□ -2.1
CDC27-216ENST00000574304 CAPSLQ8WWF8 208 aa1.91□□□□□ -2.1
CDC27-216ENST00000574304 PKIBQ9C010 78 aa1.91□□□□□ -2.1
CDC27-216ENST00000574304 LINC00574Q9H8X3 128 aa1.91□□□□□ -2.1
CDC27-216ENST00000574304 COX16Q9P0S2 106 aa1.91□□□□□ -2.1
CDC27-216ENST00000574304 FHOD3Q2V2M9 1422 aa1.91□□□□□ -2.1
CDC27-216ENST00000574304 PRAMEF26H0Y7S4 382 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 MT-ND4P03905 459 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 RPN2P04844 631 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 TRAM2Q15035 370 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 DEFB134Q4QY38 66 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 TPTE2P1Q5T6R2 138 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 TBPL2Q6SJ96 375 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 NT5DC3Q86UY8 548 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 MDP1Q86V88 176 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 GHSRQ92847 366 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 NRBF2Q96F24 287 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 NUDT9Q9BW91 350 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 SLIRPQ9GZT3 109 aaKnown RBP1.9□□□□□ -2.11
CDC27-216ENST00000574304 MTCH1Q9NZJ7 389 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 ASB3Q9Y575 518 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 PCDH11XQ9BZA7 1347 aa1.9□□□□□ -2.11
CDC27-216ENST00000574304 ITGB4P16144 1822 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 TSPOAP1O95153 1857 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 XKRY2A2RUG3 117 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 J3QRE1 110 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 NDUFAB1O14561 156 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 GATBO75879 557 aaKnown RBP1.89□□□□□ -2.11
CDC27-216ENST00000574304 IGLV7-43P04211 117 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 RAB10P61026 200 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 MRPL23Q16540 153 aaKnown RBP1.89□□□□□ -2.11
CDC27-216ENST00000574304 XKR7Q5GH72 579 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 C22orf42Q6IC83 251 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 SMARCD3Q6STE5 483 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 FAM228AQ86W67 206 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 CBLN2Q8IUK8 224 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 GTPBP8Q8N3Z3 284 aaPredicted RBP1.89□□□□□ -2.11
CDC27-216ENST00000574304 OR2Z1Q8NG97 314 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 OR4A4PQ8NGN8 299 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 HAUS1Q96CS2 278 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 ZBED3Q96IU2 234 aaPredicted RBP1.89□□□□□ -2.11
CDC27-216ENST00000574304 TICRRQ7Z2Z1 1910 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 ZSWIM8A7E2V4 1837 aa1.89□□□□□ -2.11
CDC27-216ENST00000574304 IGKV1-27A0A075B6S5 117 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 IGHV3OR16-9A0A0B4J2B5 98 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 HEATR9A2RTY3 570 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 SMCO3A2RU48 225 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 A6NDN8 102 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 H0Y8G0 127 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 OR7C2O60412 319 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 NMT2O60551 498 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 TROVE2P10155 538 aaKnown RBP eCLIP1.88□□□□□ -2.11
CDC27-216ENST00000574304 CD28P10747 220 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 HRES1P13985 223 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 OR1E1P30953 314 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 SULT1E1P49888 294 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 NDUFA8P51970 172 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 CRISP1P54107 249 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 ATP5IP56385 69 aaPredicted RBP1.88□□□□□ -2.11
CDC27-216ENST00000574304 MEF2CQ06413 473 aaPredicted RBP1.88□□□□□ -2.11
CDC27-216ENST00000574304 SELENBP1Q13228 472 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 RTL4Q6ZR62 310 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 USP50Q70EL3 339 aaPredicted RBP1.88□□□□□ -2.11
CDC27-216ENST00000574304 OR1L1Q8NH94 360 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 C18orf15Q96N68 181 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 TOLLIPQ9H0E2 274 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 IL37Q9NZH6 218 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 SLC17A4Q9Y2C5 497 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 MYO16Q9Y6X6 1858 aa1.88□□□□□ -2.11
CDC27-216ENST00000574304 TRBV9A0A0B4J1U6 114 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 C4orf51C9J302 202 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 DEDDO75618 318 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 INAFM2P0DMQ5 153 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 HSPD1P10809 573 aaKnown RBP1.87□□□□□ -2.11
CDC27-216ENST00000574304 ZNF35P13682 527 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 CSNK2A2P19784 350 aaPredicted RBP1.87□□□□□ -2.11
CDC27-216ENST00000574304 HTR1DP28221 377 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 CD70P32970 193 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 ELF3P78545 371 aaPredicted RBP1.87□□□□□ -2.11
CDC27-216ENST00000574304 MAJINQ3KP22 176 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 HSP90AB3PQ58FF7 597 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 C19orf18Q8NEA5 215 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 OR5K2Q8NHB8 316 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 LYPD6BQ8NI32 183 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 PHOSPHO2Q8TCD6 241 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 ELMO1Q92556 727 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 KCNS1Q96KK3 526 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 BTN2A3PQ96KV6 586 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 RETNQ9HD89 108 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 SLC39A1Q9NY26 324 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 FARSAQ9Y285 508 aaKnown RBP1.87□□□□□ -2.11
CDC27-216ENST00000574304 LRRC42Q9Y546 428 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 ADGRA3Q8IWK6 1321 aa1.87□□□□□ -2.11
CDC27-216ENST00000574304 UQCRFS1P1P0C7P4 283 aa1.86□□□□□ -2.11
CDC27-216ENST00000574304 ZNF121P58317 390 aaPredicted RBP1.86□□□□□ -2.11
CDC27-216ENST00000574304 TAS2R43P59537 309 aa1.86□□□□□ -2.11
CDC27-216ENST00000574304 TNFRSF9Q07011 255 aa1.86□□□□□ -2.11
CDC27-216ENST00000574304 TTC23LQ6PF05 361 aa1.86□□□□□ -2.11
CDC27-216ENST00000574304 LINC00336Q6ZUF6 198 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms