RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 NME1P15531 152 aaKnown RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 TMEM88Q6PEY1 159 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 HOGA1Q86XE5 327 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 ARMC10Q8N2F6 343 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 STOML3Q8TAV4 291 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 SPACA5Q96QH8 159 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 VN1R1Q9GZP7 353 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 SUSD2Q9UGT4 822 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 ATXN7L1Q9ULK2 861 aaPredicted RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 PRELID3BQ9Y3B1 194 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 TEX13DA0A0J9YY54 714 aaPredicted RBP13.9□□□□□ -0.18
NUP88-207ENST00000573584 F8VVB4 439 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 F8VWA3 439 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 H7C2Y5 167 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 GSK3AP49840 483 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 TAS2R31P59538 309 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 AIMP2Q13155 320 aaKnown RBP13.9□□□□□ -0.18
NUP88-207ENST00000573584 GUCA2BQ16661 112 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 BAP18Q8IXM2 172 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 OR1L3Q8NH93 324 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 TERB2Q8NHR7 220 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 MFSD8Q8NHS3 518 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 ELP5Q8TE02 316 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 RNF126Q9BV68 326 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 A0A0B4J2A0 478 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 TMEM14DPA8MWL7 114 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 CX3CR1P49238 355 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 HSD11B2P80365 405 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 TMEM71Q6P5X7 295 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 LANCL3Q6ZV70 420 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 LINC00518Q8N0U6 118 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 NMES1Q9C002 83 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 SHPKQ9UHJ6 478 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 VDAC3Q9Y277 283 aa13.9□□□□□ -0.18
NUP88-207ENST00000573584 RHPN2P1A8MT19 583 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 ADAM10O14672 748 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 ADCYAP1P18509 176 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 CYCSP99999 105 aaKnown RBP13.89□□□□□ -0.19
NUP88-207ENST00000573584 TMEM128Q5BJH2 165 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 SHISA6Q6ZSJ9 500 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 RNF144BQ7Z419 303 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 OR6S1Q8NH40 331 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 OR51E1Q8TCB6 317 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 RNF141Q8WVD5 230 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 CHST11Q9NPF2 352 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 TRBV6-7A0A0A0MS04 114 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 OR6C76A6NM76 312 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 ACTL6AO96019 429 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 BIDP55957 195 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 MICBQ29980 383 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 NKAPLQ5M9Q1 402 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 GLIPR1L1Q6UWM5 242 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 TMPPEQ6ZT21 453 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 LDLRAD3Q86YD5 345 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 SLC30A7Q8NEW0 376 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 TMED6Q8WW62 240 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 WNT2BQ93097 391 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 RRNAD1Q96FB5 475 aaKnown RBP13.89□□□□□ -0.19
NUP88-207ENST00000573584 TMEM41AQ96HV5 264 aa13.89□□□□□ -0.19
NUP88-207ENST00000573584 NUDT16L1Q9BRJ7 211 aaKnown RBP13.89□□□□□ -0.19
NUP88-207ENST00000573584 IGHV3-20A0A0C4DH32 117 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 PCP4L1A6NKN8 68 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 CHRM2P08172 466 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ZNF20P17024 532 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 NPY4RP50391 375 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 SGCAQ16586 387 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 HAGHLQ6PII5 290 aaPredicted RBP13.88□□□□□ -0.19
NUP88-207ENST00000573584 TMEM104Q8NE00 496 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 OR10S1Q8NGN2 331 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ST8SIA1Q92185 356 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ARL11Q969Q4 196 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 NUDT22Q9BRQ3 303 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ADAT1Q9BUB4 502 aaKnown RBP13.88□□□□□ -0.19
NUP88-207ENST00000573584 LPAR5Q9H1C0 372 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 DUSP15Q9H1R2 295 aaPredicted RBP13.88□□□□□ -0.19
NUP88-207ENST00000573584 FBLN5Q9UBX5 448 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ZNF629Q9UEG4 869 aaPredicted RBP13.88□□□□□ -0.19
NUP88-207ENST00000573584 ZNF175Q9Y473 711 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ANKUB1A6NFN9 424 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 F8W036 122 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 H3BML4 177 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 MPIG6BO95866 241 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 CD79AP11912 226 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 FBXW4P57775 412 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 FOXL2P58012 376 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 BLOC1S1P78537 153 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 SCRN3Q0VDG4 424 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ZNF529Q6P280 563 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 C17orf82Q86X59 251 aaPredicted RBP13.88□□□□□ -0.19
NUP88-207ENST00000573584 COMMD2Q86X83 199 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 MISPQ8IVT2 679 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ZSCAN4Q8NAM6 433 aaPredicted RBP13.88□□□□□ -0.19
NUP88-207ENST00000573584 ROBO4Q8WZ75 1007 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 RAB3CQ96E17 227 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 ZC3H10Q96K80 434 aaKnown RBP13.88□□□□□ -0.19
NUP88-207ENST00000573584 MICU1Q9BPX6 476 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 TMEM100Q9NV29 134 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 CTSFQ9UBX1 484 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 NDRG3Q9UGV2 375 aa13.88□□□□□ -0.19
NUP88-207ENST00000573584 NPIPB13A6NJU9 1138 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms