RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 GATA4P43694 442 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 BTG1P62324 171 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 HOXA4Q00056 320 aaPredicted RBP14.53□□□□□ -0.08
SMG6-212ENST00000573153 ZNF181Q2M3W8 571 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 C1QL2Q7Z5L3 287 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 HS3ST5Q8IZT8 346 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 OR6K6Q8NGW6 343 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 ZNF420Q8TAQ5 688 aaPredicted RBP14.53□□□□□ -0.08
SMG6-212ENST00000573153 SLAMF6Q96DU3 332 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 KCNJ15Q99712 375 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 REPIN1Q9BWE0 567 aaKnown RBP14.53□□□□□ -0.08
SMG6-212ENST00000573153 ZNF556Q9HAH1 456 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 SLC25A19Q9HC21 320 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 PPIAL4EA0A075B759 164 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 PPIAL4CA0A0B4J2A2 164 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 PPIAL4DF5H284 164 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 TCF21O43680 179 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 PTBP3O95758 552 aaKnown RBP14.52□□□□□ -0.09
SMG6-212ENST00000573153 HLA-DPB1P04440 258 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 SPARCP09486 303 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 PPIAL4FP0DN26 164 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 ADRA2CP18825 462 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 PAICSP22234 425 aaKnown RBP14.52□□□□□ -0.09
SMG6-212ENST00000573153 CPT2P23786 658 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 SLC6A9P48067 706 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 SRP9P49458 86 aaKnown RBP14.52□□□□□ -0.09
SMG6-212ENST00000573153 GRB2P62993 217 aaKnown RBP14.52□□□□□ -0.09
SMG6-212ENST00000573153 LCN2P80188 198 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 GINS1Q14691 196 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 FAHD2BQ6P2I3 314 aaPredicted RBP14.52□□□□□ -0.09
SMG6-212ENST00000573153 FAHD1Q6P587 224 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 PGAP1Q75T13 922 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 TIGD4Q8IY51 512 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 PARP8Q8N3A8 854 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 ATG16L2Q8NAA4 619 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 BHLHE23Q8NDY6 225 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 RNF133Q8WVZ7 376 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 DUS3LQ96G46 650 aaKnown RBP14.52□□□□□ -0.09
SMG6-212ENST00000573153 FAHD2AQ96GK7 314 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 INTS14Q96SY0 518 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 COPS4Q9BT78 406 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 SLC22A4Q9H015 551 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 TOR3AQ9H497 397 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 OPA3Q9H6K4 179 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 TMEM100Q9NV29 134 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 UBAP1Q9NZ09 502 aa14.52□□□□□ -0.09
SMG6-212ENST00000573153 ISPDA4D126 451 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 FAM183AA6NL82 134 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 J3QLI3 93 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 PRODHO43272 600 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 SBK2P0C263 348 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 PRKACGP22612 351 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 GATA3P23771 443 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 GSTT1P30711 240 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 ZNF92Q03936 586 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 FAM201AQ5SY85 155 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 SHFQ7M4L6 423 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 PRSS45Q7RTY3 260 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 SPICQ8N5J4 248 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 TEX29Q8N6K0 151 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 ERGIC1Q969X5 290 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 SPSB4Q96A44 273 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 AMELYQ99218 206 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 MED20Q9H944 212 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 TMEM165Q9HC07 324 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 METRNQ9UJH8 293 aa14.51□□□□□ -0.09
SMG6-212ENST00000573153 NOP16Q9Y3C1 178 aaKnown RBP14.51□□□□□ -0.09
SMG6-212ENST00000573153 A0A0G2JMP0 313 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 IGHV3-64DA0A0J9YX35 117 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 A0A0X1KG70 313 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 CD300LBA8K4G0 201 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 CEACAM18A8MTB9 384 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 PRR23D1E9PI22 279 aaPredicted RBP14.5□□□□□ -0.09
SMG6-212ENST00000573153 CYB5R3P00387 301 aaPredicted RBP14.5□□□□□ -0.09
SMG6-212ENST00000573153 PRR23D2P0DMB1 279 aaPredicted RBP14.5□□□□□ -0.09
SMG6-212ENST00000573153 EPHA1P21709 976 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 POU1F1P28069 291 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 CD200P41217 278 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 SLC15A1P46059 708 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 SLC35D3Q5M8T2 416 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 GLYATL3Q5SZD4 288 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 MRPL21Q7Z2W9 205 aaKnown RBP14.5□□□□□ -0.09
SMG6-212ENST00000573153 DPY19L4Q7Z388 723 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.5□□□□□ -0.09
SMG6-212ENST00000573153 OR4M2Q8NGB6 313 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 OR2AE1Q8NHA4 323 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 Q8TCH9 128 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 DVL3Q92997 716 aaPredicted RBP14.5□□□□□ -0.09
SMG6-212ENST00000573153 ABHD6Q9BV23 337 aa14.5□□□□□ -0.09
SMG6-212ENST00000573153 XRCC2O43543 280 aa14.49□□□□□ -0.09
SMG6-212ENST00000573153 TIPRLO75663 272 aa14.49□□□□□ -0.09
SMG6-212ENST00000573153 ZNF205O95201 554 aa14.49□□□□□ -0.09
SMG6-212ENST00000573153 APOC1P02654 83 aa14.49□□□□□ -0.09
SMG6-212ENST00000573153 WNT2P09544 360 aa14.49□□□□□ -0.09
SMG6-212ENST00000573153 ZNF12P17014 697 aa14.49□□□□□ -0.09
SMG6-212ENST00000573153 SLC2A5P22732 501 aa14.49□□□□□ -0.09
SMG6-212ENST00000573153 MDH2P40926 338 aaKnown RBP14.49□□□□□ -0.09
SMG6-212ENST00000573153 OPRL1P41146 370 aa14.49□□□□□ -0.09
SMG6-212ENST00000573153 EIF2B1Q14232 305 aaKnown RBP14.49□□□□□ -0.09
SMG6-212ENST00000573153 ATP6AP1Q15904 470 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms