RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 LIPEQ05469 1076 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 TRAP1Q12931 704 aaKnown RBP8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 OR8G1Q15617 311 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 OR8B8Q15620 311 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 C11orf91Q3C1V1 193 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 SLC36A3Q495N2 470 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 SLC18B1Q6NT16 456 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 GDPGP1Q6ZNW5 385 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 CFAP77Q6ZQR2 320 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 TSEN54Q7Z6J9 526 aaKnown RBP8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 ARPINQ7Z6K5 226 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 NAA40Q86UY6 237 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 SLC15A3Q8IY34 581 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 OR6V1Q8N148 313 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 BOLLQ8N9W6 283 aaKnown RBP8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 SLC26A10Q8NG04 563 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 OR2AJ1Q8NGZ0 328 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 PITX2Q99697 317 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 ATF6BQ99941 703 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 SRA1Q9HD15 236 aaKnown RBP8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 CYB5R1Q9UHQ9 305 aa8.16□□□□□ -1.1
TRAPPC1-205ENST00000572656 OOEPA6NGQ2 149 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 CD300LBA8K4G0 201 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 TROVE2P10155 538 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 TPTEP56180 551 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 ARF6P62330 175 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 FGD3Q5JSP0 725 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 SMARCD3Q6STE5 483 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 BTN2A1Q7KYR7 527 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 MRPL21Q7Z2W9 205 aaKnown RBP8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 ZBTB46Q86UZ6 589 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 LINC00346Q8IVM7 164 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 SPERTQ8NA61 448 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 ZSCAN4Q8NAM6 433 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 SCCPDHQ8NBX0 429 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 RCN3Q96D15 328 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 ERMAPQ96PL5 475 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 NMNAT3Q96T66 252 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 ADAT1Q9BUB4 502 aaKnown RBP8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 RASSF4Q9H2L5 321 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 DPAGT1Q9H3H5 408 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 C16orf95Q9H693 158 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 CNTD2Q9H8S5 307 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 SMURF1Q9HCE7 757 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 KRCC1Q9NPI7 259 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 PNRC2Q9NPJ4 139 aaKnown RBP8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 AURKCQ9UQB9 309 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 FAM32AQ9Y421 112 aaKnown RBP8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 CAPN7Q9Y6W3 813 aa8.15□□□□□ -1.1
TRAPPC1-205ENST00000572656 PRKDCP78527 4128 aaKnown RBP8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 TRBV4-1A0A0J9YWV2 114 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 M0R135 149 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 DVL1O14640 695 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 ARPC3O15145 178 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 SLC22A2O15244 555 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 OR10H3O60404 316 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 TSPAN15O95858 294 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 RENP00797 406 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 GYPAP02724 150 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 RHCEP18577 417 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 GGT2P36268 569 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 ZNF92Q03936 586 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 SEC23BQ15437 767 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 RFX4Q33E94 735 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 CDONQ4KMG0 1287 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 Q6ZSV7 163 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 FAM90A1Q86YD7 464 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 C1QL4Q86Z23 238 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 PDZD9Q8IXQ8 264 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 PIP4P2Q8N4L2 257 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 OR4K13Q8NH42 304 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 FAM110DQ8TAY7 271 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 NPRL2Q8WTW4 380 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 LRTOMTQ8WZ04 291 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 SPTSSAQ969W0 71 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 ZNF799Q96GE5 643 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 HOPXQ9BPY8 73 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 RPRD1BQ9NQG5 326 aaKnown RBP8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 C1orf123Q9NWV4 160 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 MRPL15Q9P015 296 aaKnown RBP8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 NDUFAF4Q9P032 175 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 KAAG1Q9UBP8 84 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 KCNG2Q9UJ96 466 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 RPUSD1Q9UJJ7 312 aaKnown RBP8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 FAM96BQ9Y3D0 163 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 KPTNQ9Y664 436 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 CMYA5Q8N3K9 4069 aa8.14□□□□□ -1.11
TRAPPC1-205ENST00000572656 A0A1B0GVI7 797 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 C5orf63A6NC05 138 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 GGT3PA6NGU5 568 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 NME4O00746 187 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 FCN3O75636 299 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 TSPAN9O75954 239 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 LHBP01229 141 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 HLA-DQA2P01906 255 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 GRPP07492 148 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 HIST1H1CP16403 213 aaKnown RBP8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 SLC6A6P31641 620 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 GSK3BP49841 420 aa8.13□□□□□ -1.11
TRAPPC1-205ENST00000572656 SLC7A2P52569 658 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms