RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 AQP5P55064 265 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 LIM2P55344 173 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 HSD17B7P56937 341 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 RAB38P57729 211 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 RAB4BP61018 213 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 POLR2GP62487 172 aaKnown RBP eCLIP4.49□□□□□ -1.69
SF3B3-214ENST00000572365 FUT7Q11130 342 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 MERTKQ12866 999 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 PON3Q15166 354 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 C18orf21Q32NC0 220 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-214ENST00000572365 YIF1BQ5BJH7 314 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 TTC23Q5W5X9 447 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 ELP2Q6IA86 826 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 TRIM40Q6P9F5 258 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
SF3B3-214ENST00000572365 LINC00523Q86TU6 105 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 IFNEQ86WN2 208 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 CPNE9Q8IYJ1 553 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 MICU2Q8IYU8 434 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 CLEC4FQ8N1N0 589 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF786Q8N393 782 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 WDSUB1Q8N9V3 476 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 OR7G3Q8NG95 312 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 OR7A2PQ8NGA2 310 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 NT5CQ8TCD5 201 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF418Q8TF45 676 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-214ENST00000572365 KCTD4Q8WVF5 259 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 PTP4A1Q93096 173 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 NEIL2Q969S2 332 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 NTNG2Q96CW9 530 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 PPP3R2Q96LZ3 170 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 SLC6A7Q99884 636 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 BPESC1Q9GZL8 116 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 WWTR1Q9GZV5 400 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 METTL7AQ9H8H3 244 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 NANOGQ9H9S0 305 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 CCNB1IP1Q9NPC3 277 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 FBXO6Q9NRD1 293 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-214ENST00000572365 ADPRHL2Q9NX46 363 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 WWOXQ9NZC7 414 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 DCDC2Q9UHG0 476 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 KLHL21Q9UJP4 597 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 PDE10AQ9Y233 779 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 NDUFAF1Q9Y375 327 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 PEX16Q9Y5Y5 336 aa4.49□□□□□ -1.69
SF3B3-214ENST00000572365 CSMD3Q7Z407 3707 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 LOC105371242A0A075B767 164 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 RNF103-CHMP3A0A140T963 221 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 C2orf92A0A1B0GVN3 265 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 LINC00862A6NCI5 91 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 HACD1B0YJ81 288 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 KRBOX1C9JBD0 128 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 SAP18O00422 153 aaKnown RBP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 TP53I11O14683 189 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 ST8SIA3O43173 380 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 GMDSO60547 372 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 SNNO75324 88 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 VAPBO95292 243 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 SNAP29O95721 258 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF708P17019 499 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 FASP25445 335 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 IVDP26440 423 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 CAPGP40121 348 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 PTGDSP41222 190 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 NKX2-1P43699 371 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 KCNJ1P48048 391 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 TTPAP49638 278 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 OR2B6P58173 313 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 CSNK2BP67870 215 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 PRKCDQ05655 676 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 PDIA2Q13087 525 aaKnown RBP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 IL18R1Q13478 541 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 NRF1Q16656 503 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 SLC36A3Q495N2 470 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 FGD3Q5JSP0 725 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 SLC35D3Q5M8T2 416 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 C11orf71Q6IPW1 123 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 FAHD2BQ6P2I3 314 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 BTNL8Q6UX41 500 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 NHLRC1Q6VVB1 395 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 RBMS3Q6XE24 437 aaKnown RBP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 B3GLCTQ6Y288 498 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 CYS1Q717R9 158 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 AQP12AQ8IXF9 295 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 KLHDC8AQ8IYD2 350 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 C4orf33Q8N1A6 199 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 ZCCHC24Q8N2G6 241 aaKnown RBP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 CCNYL1Q8N7R7 359 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 STPG4Q8N801 248 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 ZDHHC22Q8N966 263 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 UXS1Q8NBZ7 420 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 OR6Q1Q8NGQ2 317 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 OR5H6Q8NGV6 325 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 ZFAND1Q8TCF1 268 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 EEF1AKMT1Q8WVE0 214 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 UFD1Q92890 307 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 FBXO17Q96EF6 278 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 BSCL2Q96G97 398 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-214ENST00000572365 FAHD2AQ96GK7 314 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms