RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 H0YAE9 185 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 TBX1O43435 398 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 LY6HO94772 140 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 CLPTM1O96005 669 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 ANXA2P07355 339 aaKnown RBP11.38□□□□□ -0.59
CCDC40-205ENST00000571028 SBK2P0C263 348 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 ACSM4P0C7M7 580 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 EGR1P18146 543 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 GCH1P30793 250 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 GLRXP35754 106 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 SLC15A1P46059 708 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 CXCR4P61073 352 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF91Q05481 1191 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 POU4F2Q12837 409 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 RSPO1Q2MKA7 263 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-205ENST00000571028 UNQ6126/PRO20091Q6UXV3 157 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 LRP11Q86VZ4 500 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 RNF133Q8WVZ7 376 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 APH1BQ8WW43 257 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 MRPL37Q9BZE1 423 aaKnown RBP11.38□□□□□ -0.59
CCDC40-205ENST00000571028 BCL2L14Q9BZR8 327 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 OR2J1Q9GZK6 312 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 PLK3Q9H4B4 646 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF442Q9H7R0 627 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 SLCO1C1Q9NYB5 712 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 A0A1W2PQL4 384 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 PRR32B1ATL7 298 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 WBP4O75554 376 aaKnown RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 DBTP11182 482 aaKnown RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 MPV17P39210 176 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 VHLP40337 213 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 CX3CR1P49238 355 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 PRSS12P56730 875 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 SELENOVP59797 346 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 GRB2P62993 217 aaKnown RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF718Q3SXZ3 478 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 SLC25A30Q5SVS4 291 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF540Q8NDQ6 660 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 SYNPRQ8TBG9 265 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 ZFAND2BQ8WV99 257 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 TFAP2CQ92754 450 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 GCDHQ92947 438 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 MRPL24Q96A35 216 aaKnown RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 APOBEC3DQ96AK3 386 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 DCLRE1CQ96SD1 692 aaKnown RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 KCNJ15Q99712 375 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 VRK1Q99986 396 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 DDX28Q9NUL7 540 aaKnown RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 HAO2Q9NYQ3 351 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 MYEF2Q9P2K5 600 aaKnown RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 ATPIF1Q9UII2 106 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 GTF2A1LQ9UNN4 478 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 RPL36Q9Y3U8 105 aaKnown RBP11.37□□□□□ -0.59
CCDC40-205ENST00000571028 TMEM14AQ9Y6G1 99 aa11.37□□□□□ -0.59
CCDC40-205ENST00000571028 IGHV4-61A0A0C4DH41 118 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 DAPL1A0PJW8 107 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 C5orf63A6NC05 138 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 OPRL1P41146 370 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 ALDH3B1P43353 468 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 RGS6P49758 472 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 SNRPD2P62316 118 aaKnown RBP11.36□□□□□ -0.59
CCDC40-205ENST00000571028 CDK5R2Q13319 367 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 TMED1Q13445 227 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 IL18R1Q13478 541 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 HLXQ14774 488 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-205ENST00000571028 MST1LQ2TV78 715 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 GFOD2Q3B7J2 385 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 KCTD18Q6PI47 426 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF322Q6U7Q0 402 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-205ENST00000571028 PLEKHG7Q6ZR37 379 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 FAM57BQ71RH2 274 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 SSX6Q7RTT6 188 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 YIPF7Q8N8F6 280 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 KLF14Q8TD94 323 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-205ENST00000571028 ASB17Q8WXJ9 295 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 CMBLQ96DG6 245 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 LGALS12Q96DT0 336 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 PGAM5Q96HS1 289 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 MROQ9BYG7 248 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 MYOZ1Q9NP98 299 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-205ENST00000571028 TBCCD1Q9NVR7 557 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 TAAR3PQ9P1P4 343 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 LRP12Q9Y561 859 aa11.36□□□□□ -0.59
CCDC40-205ENST00000571028 A0A0A6YYJ9 748 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 LOC390937A0A1W2PQ73 354 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 TMEM129A0AVI4 362 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 VWC2LB2RUY7 222 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 B9A039 149 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 H0YJX3 145 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 PHYHO14832 338 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 FAM20BO75063 409 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 RPP14O95059 124 aaKnown RBP11.35□□□□□ -0.59
CCDC40-205ENST00000571028 ADRA2AP08913 450 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 OR2T7P0C7T2 308 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 PCMT1P22061 227 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 ANOS1P23352 680 aa11.35□□□□□ -0.59
CCDC40-205ENST00000571028 KLF3P57682 345 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF121P58317 390 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms