RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 RBMS3Q6XE24 437 aaKnown RBP17.28■□□□□ 0.36
LITAF-205ENST00000570904 DCXRQ7Z4W1 244 aa17.28■□□□□ 0.36
LITAF-205ENST00000570904 NEIL1Q96FI4 390 aaPredicted RBP17.28■□□□□ 0.36
LITAF-205ENST00000570904 IGHV2-70DA0A0C4DH43 119 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 CD300LBA8K4G0 201 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 B2RBV5 119 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 SPARCP09486 303 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 IGHV4-38-2P0DP08 117 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 PITPNBP48739 271 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 RAD23AP54725 363 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 ZNF92Q03936 586 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 CRMP1Q14194 572 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 OR8G1Q15617 311 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 MPPED2Q15777 294 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 BTNL3Q6UXE8 466 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 DOK3Q7L591 496 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 FITM2Q8N6M3 262 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 CELF2-AS1Q8N7Q2 184 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 OR8B3Q8NGG8 313 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 OR11L1Q8NGX0 322 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 OR4Q3Q8NH05 313 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 Q8TCH9 128 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 ZNF48Q96MX3 618 aaPredicted RBP17.27■□□□□ 0.36
LITAF-205ENST00000570904 OR8B2Q96RD0 313 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 COPS4Q9BT78 406 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 ARMC1Q9NVT9 282 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 U3KQV3 271 aa17.27■□□□□ 0.36
LITAF-205ENST00000570904 DNAJC9-AS1A6NH13 148 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 SLC2A1P11166 492 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 CPT2P23786 658 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 OTX1P32242 354 aaPredicted RBP17.26■□□□□ 0.35
LITAF-205ENST00000570904 PRKXP51817 358 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 MNAT1P51948 309 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 AWAT1Q58HT5 328 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 GLYATL3Q5SZD4 288 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 LYPD2Q6UXB3 125 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 PARP8Q8N3A8 854 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 LNX2Q8N448 690 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 ZNF511Q8NB15 262 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 RAB40AQ8WXH6 277 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 DACT3Q96B18 629 aaPredicted RBP17.26■□□□□ 0.35
LITAF-205ENST00000570904 PLEKHA8Q96JA3 519 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 ADAT1Q9BUB4 502 aaKnown RBP17.26■□□□□ 0.35
LITAF-205ENST00000570904 SAMHD1Q9Y3Z3 626 aaKnown RBP17.26■□□□□ 0.35
LITAF-205ENST00000570904 N6AMT1Q9Y5N5 214 aa17.26■□□□□ 0.35
LITAF-205ENST00000570904 SOX21Q9Y651 276 aaPredicted RBP17.26■□□□□ 0.35
LITAF-205ENST00000570904 GGT3PA6NGU5 568 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 FSTL3O95633 263 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 CLUP10909 449 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 SPI1P17947 270 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 FMO3P31513 532 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 ENTPD1P49961 510 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 MS4A2Q01362 244 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 LCN8Q6JVE9 175 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 DRAM2Q6UX65 266 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 LRRN1Q6UXK5 716 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 SPATC1Q76KD6 591 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 NLRC3Q7RTR2 1065 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 DHFR2Q86XF0 187 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 ERGIC1Q969X5 290 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 SLAMF6Q96DU3 332 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 C1orf147Q96MC9 270 aaPredicted RBP17.25■□□□□ 0.35
LITAF-205ENST00000570904 NMNAT2Q9BZQ4 307 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 MS4A7Q9GZW8 240 aaPredicted RBP17.25■□□□□ 0.35
LITAF-205ENST00000570904 MAGIXQ9H6Y5 334 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 CENPMQ9NSP4 180 aa17.25■□□□□ 0.35
LITAF-205ENST00000570904 ZNF593O00488 134 aaPredicted RBP17.24■□□□□ 0.35
LITAF-205ENST00000570904 PRTN3P24158 256 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 BAMBIQ13145 260 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 TAF13Q15543 124 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 MICAQ29983 383 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 OR2T5Q6IEZ7 315 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 DCDC5Q6ZRR9 648 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 BOLLQ8N9W6 283 aaKnown RBP17.24■□□□□ 0.35
LITAF-205ENST00000570904 OR2T33Q8NG76 320 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 OR6K6Q8NGW6 343 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 OR2T29Q8NH02 315 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 NSL1Q96IY1 281 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 NUDT16L1Q9BRJ7 211 aaKnown RBP17.24■□□□□ 0.35
LITAF-205ENST00000570904 DGCR6LQ9BY27 220 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 SLC22A4Q9H015 551 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 REEP1Q9H902 201 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 CLN8Q9UBY8 286 aa17.24■□□□□ 0.35
LITAF-205ENST00000570904 NOP16Q9Y3C1 178 aaKnown RBP17.24■□□□□ 0.35
LITAF-205ENST00000570904 TRAV40A0A0B4J280 105 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 SLC25A1P53007 311 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 PCK2Q16822 640 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 FAM98BQ52LJ0 330 aaKnown RBP17.23■□□□□ 0.35
LITAF-205ENST00000570904 WDR25Q64LD2 544 aaPredicted RBP17.23■□□□□ 0.35
LITAF-205ENST00000570904 ARHGAP24Q8N264 748 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 OR56B2PQ8NGI1 322 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 UPRTQ96BW1 309 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 ZMYND19Q96E35 227 aaPredicted RBP17.23■□□□□ 0.35
LITAF-205ENST00000570904 CCT8L2Q96SF2 557 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 KCNJ15Q99712 375 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 MMADHCQ9H3L0 296 aaPredicted RBP17.23■□□□□ 0.35
LITAF-205ENST00000570904 MUC13Q9H3R2 512 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 FN3KRPQ9HA64 309 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 RNF7Q9UBF6 113 aa17.23■□□□□ 0.35
LITAF-205ENST00000570904 BAIAP2Q9UQB8 552 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms