RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SIGLEC7Q9Y286 467 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 TMED7Q9Y3B3 224 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 MRPS18CQ9Y3D5 142 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 RPL36Q9Y3U8 105 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 PCDHGB1Q9Y5G3 927 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 MUC6Q6W4X9 2439 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 TRAV18A0A075B6X5 111 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 TEX13DA0A0J9YY54 714 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 SMIM31A0A1B0GVY4 71 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 RIIAD1A6NNX1 92 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 E9PI62 339 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 KPNA4O00629 521 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 BHLHE40O14503 412 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 ARPC3O15145 178 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 SURF4O15260 269 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 NPIPB7O75200 414 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 TRIM3O75382 744 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 OR6A2O95222 327 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 SOX14O95416 240 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 CLDN14O95500 239 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 CELA2AP08217 269 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 TSPAN19P0C672 248 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF3P17036 446 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 FUT1P19526 365 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 EPHA2P29317 976 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 SSTP61278 116 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 SLC35A2P78381 396 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 CDC20Q12834 499 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 MYBPHQ13203 477 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 KLHL22Q53GT1 634 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 C1orf140Q5VVS0 124 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 TIGD3Q6B0B8 471 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 OR7E24Q6IFN5 339 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 SLC25A24Q6NUK1 477 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 SIGLEC15Q6ZMC9 328 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 C16orf47Q6ZP98 133 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 PRSS48Q7RTY5 328 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 HDDC2Q7Z4H3 204 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 NANOGNBQ7Z5D8 188 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 CCDC71Q8IV32 467 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 GTPBP8Q8N3Z3 284 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 OR2M3Q8NG83 312 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 FAM216AQ8WUB2 273 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 PSMF1Q92530 271 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 TM9SF4Q92544 642 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 GPA33Q99795 319 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 SSX3Q99909 188 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 FAM173AQ9BQD7 235 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 PIGQQ9BRB3 760 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 TAPBPLQ9BX59 468 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 TSSK6Q9BXA6 273 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 DUSP21Q9H596 190 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 EGLN3Q9H6Z9 239 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 CMC2Q9NRP2 79 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF701Q9NV72 531 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 QPCTLQ9NXS2 382 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 STMN3Q9NZ72 180 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 KLHL21Q9UJP4 597 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 DKKL1Q9UK85 242 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 KLF13Q9Y2Y9 288 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 HDGFL3Q9Y3E1 203 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 OR2W1Q9Y3N9 320 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 MRPS18BQ9Y676 258 aaKnown RBP6.16□□□□□ -1.42
CNOT1-222ENST00000570139 PCNX2A6NKB5 2137 aa6.16□□□□□ -1.42
CNOT1-222ENST00000570139 NINQ8N4C6 2090 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 IGKV1D-42A0A075B6H8 117 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 OR5H15A6NDH6 313 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 INAFM1C9JVW0 142 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 F8WDY8 70 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 KLRC4-KLRK1H3BQV0 150 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 WBP4O75554 376 aaKnown RBP6.15□□□□□ -1.42
CNOT1-222ENST00000570139 BGLAPP02818 100 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 ASAH2BP0C7U1 165 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 CCL3P10147 92 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 RPS2P15880 293 aaKnown RBP6.15□□□□□ -1.42
CNOT1-222ENST00000570139 CNR1P21554 472 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 SRD5A2P31213 254 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 OC90Q02509 493 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-222ENST00000570139 RAB40BQ12829 278 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 FOXF1Q12946 379 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 LCN1P1Q5VSP4 162 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 RNLSQ5VYX0 342 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 NXNL2Q5VZ03 156 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 ARSKQ6UWY0 536 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 SLC16A9Q7RTY1 509 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 FJX1Q86VR8 437 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 TCEANCQ8N8B7 351 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 WDSUB1Q8N9V3 476 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 TMEM178AQ8NBL3 297 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 BPIFB6Q8NFQ5 453 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 OR11H4Q8NGC9 324 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 OR8D4Q8NGM9 314 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 OR13C2Q8NGS9 318 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 OR5J2Q8NH18 312 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 MFSD8Q8NHS3 518 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 CNIH3Q8TBE1 160 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 APH1BQ8WW43 257 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 THRSPQ92748 146 aa6.15□□□□□ -1.42
CNOT1-222ENST00000570139 FGF11Q92914 225 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms