RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 COX10Q12887 443 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 TRAP1Q12931 704 aaKnown RBP9.96□□□□□ -0.82
CAPN3-220ENST00000569827 KLRD1Q13241 179 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 PDCD1Q15116 288 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 KCNMB1Q16558 191 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 KRTAP27-1Q3LI81 207 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 SLC18B1Q6NT16 456 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 CGB2Q6NT52 195 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 FKBP9P1Q75LS8 142 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 PGAP1Q75T13 922 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 BTN2A1Q7KYR7 527 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 MRPL21Q7Z2W9 205 aaKnown RBP9.96□□□□□ -0.82
CAPN3-220ENST00000569827 RNF113BQ8IZP6 322 aaKnown RBP9.96□□□□□ -0.82
CAPN3-220ENST00000569827 OR6V1Q8N148 313 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 PNKDQ8N490 385 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 FAM156AQ8NDB6 213 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 SLC26A10Q8NG04 563 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 ST8SIA4Q92187 359 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 DYRK2Q92630 601 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 ERMAPQ96PL5 475 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-220ENST00000569827 NMNAT3Q96T66 252 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 PNRC2Q9NPJ4 139 aaKnown RBP9.96□□□□□ -0.82
CAPN3-220ENST00000569827 RPRD1BQ9NQG5 326 aaKnown RBP9.96□□□□□ -0.82
CAPN3-220ENST00000569827 SIRT7Q9NRC8 400 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 C1orf123Q9NWV4 160 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 KIF17Q9P2E2 1029 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 ATPIF1Q9UII2 106 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 N6AMT1Q9Y5N5 214 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 POMT1Q9Y6A1 747 aa9.96□□□□□ -0.82
CAPN3-220ENST00000569827 hCG_1807616A0A1W2PRN6 198 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 HTR3EA5X5Y0 456 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 A6NLC8 198 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 BBIP1A8MTZ0 92 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 NME4O00746 187 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 DVL1O14640 695 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 GSTA4O15217 222 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 AHCYL1O43865 530 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 CLPXO76031 633 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 TFF1P04155 84 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 MDH1P40925 334 aaKnown RBP9.95□□□□□ -0.82
CAPN3-220ENST00000569827 IER3P46695 156 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 ZNF92Q03936 586 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 EGR3Q06889 387 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 COQ5Q5HYK3 327 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 GPR139Q6DWJ6 353 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 LYPD4Q6UWN0 246 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 COLCA1Q6ZS62 124 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 CBLL1Q75N03 491 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 VMO1Q7Z5L0 202 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 FAM90A1Q86YD7 464 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 SLC15A3Q8IY34 581 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 FAM86B1Q8N7N1 296 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 C11orf44Q8N8P7 122 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 SDR9C7Q8NEX9 313 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 OR4K13Q8NH42 304 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 OR52J3Q8NH60 311 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 TBC1D15Q8TC07 691 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 FANK1Q8TC84 345 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 SEH1LQ96EE3 360 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 MAP6Q96JE9 813 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 GPX7Q96SL4 187 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-220ENST00000569827 ATF6BQ99941 703 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 TRIM15Q9C019 465 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 FN3KRPQ9HA64 309 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 ONECUT1Q9UBC0 465 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 B9D1Q9UPM9 204 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 TMEM5Q9Y2B1 443 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 V9GYQ6 96 aa9.95□□□□□ -0.82
CAPN3-220ENST00000569827 OOEPA6NGQ2 149 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 UNC119BA6NIH7 251 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 CD300LBA8K4G0 201 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 HLA-DQA2P01906 255 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 H1F0P07305 194 aaKnown RBP9.94□□□□□ -0.82
CAPN3-220ENST00000569827 SLC2A1P11166 492 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 SELLP14151 372 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 HIST1H1CP16403 213 aaKnown RBP9.94□□□□□ -0.82
CAPN3-220ENST00000569827 CPT2P23786 658 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 GGT2P36268 569 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 NPY4RP50391 375 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 RPS6KA3P51812 740 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 SLC7A2P52569 658 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 BPIFB3P59826 476 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 GMFBP60983 142 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 GLYATL3Q5SZD4 288 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 METTL21CQ5VZV1 264 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 CD276Q5ZPR3 534 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 DHRS7BQ6IAN0 325 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-220ENST00000569827 ADCK1Q86TW2 530 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 LDLRAD3Q86YD5 345 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 GCSAMQ8N6F7 178 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 PNLDC1Q8NA58 520 aaKnown RBP9.94□□□□□ -0.82
CAPN3-220ENST00000569827 FAM162AQ96A26 154 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 NDEL1Q9GZM8 345 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 NSRP1Q9H0G5 558 aaKnown RBP9.94□□□□□ -0.82
CAPN3-220ENST00000569827 TOR3AQ9H497 397 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 PPP1R3EQ9H7J1 279 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 FGFR1OP2Q9NVK5 253 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 GID8Q9NWU2 228 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 MRPL22Q9NWU5 206 aaKnown RBP9.94□□□□□ -0.82
CAPN3-220ENST00000569827 AURKCQ9UQB9 309 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms