RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 LGALS4P56470 323 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 TAS2R41P59536 307 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 STX1BP61266 288 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 CD83Q01151 205 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 CCDC92Q53HC0 331 aaPredicted RBP7.05□□□□□ -1.28
SMG1-216ENST00000569122 RABL3Q5HYI8 236 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 SLC2A7Q6PXP3 512 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 CRIP3Q6Q6R5 217 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 COLCA1Q6ZS62 124 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 MRPL21Q7Z2W9 205 aaKnown RBP7.05□□□□□ -1.28
SMG1-216ENST00000569122 GLB1L2Q8IW92 636 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 Q8N7P7 452 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 Q8NFD4 153 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 SLC7A6Q92536 515 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 AJUBAQ96IF1 538 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 PKNOX2Q96KN3 472 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 PRSS27Q9BQR3 290 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 WNT10AQ9GZT5 417 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 DNTTIP1Q9H147 329 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 RNPEPL1Q9HAU8 725 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 PALMDQ9NP74 551 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 C1orf123Q9NWV4 160 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 MRPL15Q9P015 296 aaKnown RBP7.05□□□□□ -1.28
SMG1-216ENST00000569122 POLR1DQ9Y2S0 133 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 TSSC4Q9Y5U2 329 aaPredicted RBP7.05□□□□□ -1.28
SMG1-216ENST00000569122 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
SMG1-216ENST00000569122 TRBV23-1A0A0A0MS06 115 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 TEX13CA0A0J9YWL9 993 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 LCE6AA0A183 80 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 hCG_1809904A0A1W2PP81 198 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 A0A1W2PPE2 198 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 A0A1W2PPH5 198 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 A0A1W2PR64 198 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 A0A1W2PRV1 198 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 A0A1W2PRX2 142 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 MEGF11A6BM72 1044 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 RAMP3O60896 148 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 KHDRBS3O75525 346 aaKnown RBP7.04□□□□□ -1.28
SMG1-216ENST00000569122 OR5F1O95221 314 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 SCG5P05408 212 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 DBHP09172 617 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 LYL1P12980 280 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 CA6P23280 308 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 GK2Q14410 553 aaPredicted RBP7.04□□□□□ -1.28
SMG1-216ENST00000569122 CNN3Q15417 329 aaKnown RBP7.04□□□□□ -1.28
SMG1-216ENST00000569122 GCSAMQ8N6F7 178 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 OR5AU1Q8NGC0 362 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 OR9Q1Q8NGQ5 310 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 PFN4Q8NHR9 129 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 WIPF2Q8TF74 440 aaPredicted RBP7.04□□□□□ -1.28
SMG1-216ENST00000569122 SLCO4A1Q96BD0 722 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 MED30Q96HR3 178 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 CCL13Q99616 98 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 ADAT1Q9BUB4 502 aaKnown RBP7.04□□□□□ -1.28
SMG1-216ENST00000569122 HEXA-AS1Q9H8Q6 139 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 ZNF702PQ9H963 129 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 WDR76Q9H967 626 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 SSU72Q9NP77 194 aaKnown RBP7.04□□□□□ -1.28
SMG1-216ENST00000569122 ABCB10Q9NRK6 738 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 THAP1Q9NVV9 213 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 SLC25A37Q9NYZ2 338 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 DNAJB11Q9UBS4 358 aa7.04□□□□□ -1.28
SMG1-216ENST00000569122 EPPK1P58107 5090 aaKnown RBP7.04□□□□□ -1.28
SMG1-216ENST00000569122 A0A1W2PQ09 198 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 TCRBV4S1A1TA0A5B7 111 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 PRSS37A4D1T9 235 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 GGT3PA6NGU5 568 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 CD300LBA8K4G0 201 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 VGLL3A8MV65 326 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 H0YAE9 185 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 RER1O15258 196 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 TIPRLO75663 272 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 LCATP04180 440 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 GRPP07492 148 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 HOXB9P17482 250 aaPredicted RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 POU1F1P28069 291 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 HOXD3P31249 432 aaPredicted RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 GGT2P36268 569 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 RPL4P36578 427 aaKnown RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 VDAC2P45880 294 aaPredicted RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 SLC9A3P48764 834 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 DGCR2P98153 550 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 KLRD1Q13241 179 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 CYP51A1Q16850 503 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 DMRTC1Q5HYR2 192 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 ATPAF1Q5TC12 328 aaPredicted RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 MEPCEQ7L2J0 689 aaKnown RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 CPLX4Q7Z7G2 160 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 CENPVQ7Z7K6 275 aaPredicted RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 OAFQ86UD1 273 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 RBM45Q8IUH3 476 aaKnown RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 GPR32P1Q8NGA4 272 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 OR51D1Q8NGF3 324 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 RPS4Y2Q8TD47 263 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 TMEM255BQ8WV15 326 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 H1FXQ92522 213 aaKnown RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 BPIFA2Q96DR5 249 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 C16orf45Q96MC5 204 aaPredicted RBP7.03□□□□□ -1.28
SMG1-216ENST00000569122 VAPAQ9P0L0 249 aa7.03□□□□□ -1.28
SMG1-216ENST00000569122 RIMS3Q9UJD0 308 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms