RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 IGHV3-64DA0A0J9YX35 117 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 RIIAD1A6NNX1 92 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 CD300LBA8K4G0 201 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 ZNF878C9JN71 531 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 IFNL4K9M1U5 179 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 FOXH1O75593 365 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 LCATP04180 440 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 SBK2P0C263 348 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 SLC2A1P11166 492 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 ZNF12P17014 697 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 ZNF3P17036 446 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 FMO3P31513 532 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 MDH2P40926 338 aaKnown RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 SRP9P49458 86 aaKnown RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 TPTEP56180 551 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 HILS1P60008 231 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 MPPED2Q15777 294 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 ZNF404Q494X3 552 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 DNAL1Q4LDG9 190 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 KLF17Q5JT82 389 aaPredicted RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 FAM201AQ5SY85 155 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 PRAMEF6Q5VXH4 476 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 SLC27A4Q6P1M0 643 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 SHQ1Q6PI26 577 aaKnown RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 USP43Q70EL4 1123 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 PGAP1Q75T13 922 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 MRPL21Q7Z2W9 205 aaKnown RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 MOGAT3Q86VF5 341 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 MUC20Q8N307 709 aaPredicted RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 KLHL36Q8N4N3 616 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 OR6K6Q8NGW6 343 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 TEX47Q8TBZ9 253 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 BCAS4Q8TDM0 211 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 GIPC3Q8TF64 312 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 RNF133Q8WVZ7 376 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 DVL3Q92997 716 aaPredicted RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 SPTSSAQ969W0 71 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 LRGUKQ96M69 825 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 KCNJ15Q99712 375 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 COPS4Q9BT78 406 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 ADAT1Q9BUB4 502 aaKnown RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 NTN4Q9HB63 628 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 TMEM165Q9HC07 324 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 ESM1Q9NQ30 184 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 PDP1Q9P0J1 537 aaPredicted RBP6.55□□□□□ -1.36
CDH3-209ENST00000569080 METRNQ9UJH8 293 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 POMPQ9Y244 141 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 INSIG2Q9Y5U4 225 aa6.55□□□□□ -1.36
CDH3-209ENST00000569080 NBEAL1Q6ZS30 2694 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 hCG_38984A0A1B0GV85 526 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 ZNF593O00488 134 aaPredicted RBP6.54□□□□□ -1.36
CDH3-209ENST00000569080 FAM20BO75063 409 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 FKBP6O75344 327 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 GLCEO94923 617 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 ZNF205O95201 554 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 IFNGP01579 166 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 WNT2P09544 360 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 HOXB6P17509 224 aaKnown RBP6.54□□□□□ -1.36
CDH3-209ENST00000569080 SLC2A5P22732 501 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 CA6P23280 308 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 OPRL1P41146 370 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 PRKXP51817 358 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 BLVRAP53004 296 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 CDK5Q00535 292 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 MALLQ13021 153 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 ZNF154Q13106 437 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 FLOT2Q14254 428 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 KLHL12Q53G59 568 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 LIPNQ5VXI9 398 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 DPY19L4Q7Z388 723 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 WDR86Q86TI4 376 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 KLBQ86Z14 1044 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 TEX29Q8N6K0 151 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 OR56B2PQ8NGI1 322 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 OR6N2Q8NGY6 317 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 ZFAND2BQ8WV99 257 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 INTS14Q96SY0 518 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 SLC6A7Q99884 636 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 TMEM246Q9BRR3 403 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 ABHD6Q9BV23 337 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 CADM1Q9BY67 442 aaKnown RBP6.54□□□□□ -1.36
CDH3-209ENST00000569080 OPA3Q9H6K4 179 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 C7orf69Q9H7B7 122 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 SLC25A19Q9HC21 320 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 TMEM100Q9NV29 134 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 MRPL15Q9P015 296 aaKnown RBP6.54□□□□□ -1.36
CDH3-209ENST00000569080 ZNF319Q9P2F9 582 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 CTSZQ9UBR2 303 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 LRCH1Q9Y2L9 728 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 KLHDC2Q9Y2U9 406 aa6.54□□□□□ -1.36
CDH3-209ENST00000569080 PRR32B1ATL7 298 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 H3BN98 237 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 GYG2O15488 501 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 PRODHO43272 600 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 SELENOFO60613 162 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 FCN3O75636 299 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 RGS9O75916 674 aaPredicted RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 DNAJC8O75937 253 aaPredicted RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 OSMP13725 252 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms