RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 MRPL21Q7Z2W9 205 aaKnown RBP12.87□□□□□ -0.35
NME3-211ENST00000568561 PDZD9Q8IXQ8 264 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 SDR9C7Q8NEX9 313 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 C7orf34Q96L11 122 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 OR52D1Q9H346 318 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 NOX4Q9NPH5 578 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 RNF7Q9UBF6 113 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 FAM32AQ9Y421 112 aaKnown RBP12.87□□□□□ -0.35
NME3-211ENST00000568561 CENPVL3A0A0U1RRI6 287 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 OR6C68A6NDL8 312 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 LGALS8O00214 317 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 SLC22A2O15244 555 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 ADAM20O43506 726 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 FCN3O75636 299 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 RENP00797 406 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 RHCEP18577 417 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 GGT2P36268 569 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 POU4F2Q12837 409 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 OR8B8Q15620 311 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 SNAI3Q3KNW1 292 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 HSP90B2PQ58FF3 399 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 ZNF362Q5T0B9 420 aaPredicted RBP12.86□□□□□ -0.35
NME3-211ENST00000568561 ZNF826PQ6ZT77 177 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 RHOUQ7L0Q8 258 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 LNX2Q8N448 690 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 CELF2-AS1Q8N7Q2 184 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 OR2AJ1Q8NGZ0 328 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 MAP6Q96JE9 813 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 CITED1Q99966 193 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 FUZQ9BT04 418 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 IFT27Q9BW83 186 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 FN3KRPQ9HA64 309 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 MRPL22Q9NWU5 206 aaKnown RBP12.86□□□□□ -0.35
NME3-211ENST00000568561 CYB5R1Q9UHQ9 305 aa12.86□□□□□ -0.35
NME3-211ENST00000568561 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 CD300LBA8K4G0 201 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 M0R135 149 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 P2RY10O00398 339 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 TNFRSF13BO14836 293 aaPredicted RBP12.85□□□□□ -0.35
NME3-211ENST00000568561 NDUFA7O95182 113 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 GYPAP02724 150 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 PSKH1P11801 424 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 SLC6A6P31641 620 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 ZNF92Q03936 586 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 ECH1Q13011 328 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 RFX4Q33E94 735 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 LYPD4Q6UWN0 246 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 FGFRL1Q8N441 504 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 GATAD2BQ8WXI9 593 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 LHX4Q969G2 390 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 ERGIC1Q969X5 290 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 ZNF799Q96GE5 643 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 DHRS1Q96LJ7 313 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 WDFY2Q96P53 400 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 HOPXQ9BPY8 73 aaPredicted RBP12.85□□□□□ -0.35
NME3-211ENST00000568561 KRCC1Q9NPI7 259 aaPredicted RBP12.85□□□□□ -0.35
NME3-211ENST00000568561 C1orf123Q9NWV4 160 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 KIF17Q9P2E2 1029 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 ERVK-18Q9QC07 812 aa12.85□□□□□ -0.35
NME3-211ENST00000568561 IGHV3OR15-7A0A075B7D8 119 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 A0A0U1RQK1 487 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 TVP23AA6NH52 213 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 GPR137BO60478 399 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 PYCR1P32322 319 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 NPY4RP50391 375 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 TPTEP56180 551 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 PSME3P61289 254 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 ARF6P62330 175 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 ELF3P78545 371 aaPredicted RBP12.84□□□□□ -0.35
NME3-211ENST00000568561 SPIBQ01892 262 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 PRB3Q04118 309 aaPredicted RBP12.84□□□□□ -0.35
NME3-211ENST00000568561 SLC36A3Q495N2 470 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 GLYATL3Q5SZD4 288 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 SLC35F1Q5T1Q4 408 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 METTL11BQ5VVY1 283 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 CD276Q5ZPR3 534 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 ZNF620Q6ZNG0 422 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 ZBTB46Q86UZ6 589 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 TMEM86BQ8N661 226 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 RNF148Q8N7C7 305 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 SSMEM1Q8WWF3 244 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 FAM71F1Q96KD3 344 aaPredicted RBP12.84□□□□□ -0.35
NME3-211ENST00000568561 NSRP1Q9H0G5 558 aaKnown RBP12.84□□□□□ -0.35
NME3-211ENST00000568561 SIRPDQ9H106 197 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 SEMA6AQ9H2E6 1030 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 EFCAB1Q9HAE3 211 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 ACOXLQ9NUZ1 547 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 ADA2Q9NZK5 511 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 N6AMT1Q9Y5N5 214 aa12.84□□□□□ -0.35
NME3-211ENST00000568561 A0A1B0GW55 424 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 hCG_1807616A0A1W2PRN6 198 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 OOEPA6NGQ2 149 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 GGT3PA6NGU5 568 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 A6NLC8 198 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 M0QZ24 198 aa12.83□□□□□ -0.36
NME3-211ENST00000568561 ARPC3O15145 178 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms