RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 AADACL4Q5VUY2 407 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 C1orf146Q5VVC0 180 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 TMEM236Q5W0B7 351 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 PLBD1Q6P4A8 553 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 DEGS2Q6QHC5 323 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 KLBQ86Z14 1044 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 ZDHHC13Q8IUH4 622 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 ATG16L2Q8NAA4 619 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 OR2Z1Q8NG97 314 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 OR6K6Q8NGW6 343 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 ITLN1Q8WWA0 313 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 LRTOMTQ8WZ04 291 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 CCL17Q92583 94 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 MEGF10Q96KG7 1140 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 OR2V2Q96R30 315 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 AMELYQ99218 206 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 GABARAPL3Q9BY60 117 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 YIPF3Q9GZM5 350 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 ZNF665Q9H7R5 613 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 NIPAL2Q9H841 368 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 G6PC2Q9NQR9 355 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 TMEM106BQ9NUM4 274 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 HAO2Q9NYQ3 351 aa6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 MRPL15Q9P015 296 aaKnown RBP6.9□□□□□ -1.3
HDGFL3-205ENST00000568129 TRAV20A0A0B4J274 112 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 CD300LBA8K4G0 201 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 F5H0A9 414 aaPredicted RBP6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 H0YL77 283 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 H3BNX3 289 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 TNFRSF13BO14836 293 aaPredicted RBP6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 XRCC2O43543 280 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 PRKYO43930 277 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 IGLV3-1P01715 115 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 LYNP07948 512 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 MSMBP08118 114 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 SPARCP09486 303 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 PCMT1P22061 227 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 POU1F1P28069 291 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 PMELP40967 661 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 SRP9P49458 86 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 FAM3AP98173 230 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 ROM1Q03395 351 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 EIF2B1Q14232 305 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 SNAPC1Q16533 368 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 TUSC1Q2TAM9 212 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 CR1LQ2VPA4 569 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 GLYATL3Q5SZD4 288 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 PGAP1Q75T13 922 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 CXXC5Q7LFL8 322 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 SLC16A9Q7RTY1 509 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 AMIGO2Q86SJ2 522 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 ERI1Q8IV48 349 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 BBS1Q8NFJ9 593 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 OR52H1Q8NGJ2 320 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 OR6N2Q8NGY6 317 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 TMEM186Q96B77 213 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 SGK3Q96BR1 496 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 RAB39BQ96DA2 213 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 ZMYND19Q96E35 227 aaPredicted RBP6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 TIMD4Q96H15 378 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 COPS4Q9BT78 406 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 TEX12Q9BXU0 123 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 SHARPINQ9H0F6 387 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 OR51V1Q9H2C8 321 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 SP140LQ9H930 580 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 KRT84Q9NSB2 600 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 DCAF16Q9NXF7 216 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 USE1Q9NZ43 259 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 TREM2Q9NZC2 230 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 ZNF319Q9P2F9 582 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 ENOPH1Q9UHY7 261 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 PPP1R3CQ9UQK1 317 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 NOP16Q9Y3C1 178 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 ATRQ13535 2644 aa6.89□□□□□ -1.31
HDGFL3-205ENST00000568129 hCG_38984A0A1B0GV85 526 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 A8MXK9 166 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 TPD52L2O43399 206 aaKnown RBP6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 PLPP2O43688 288 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 SELENOFO60613 162 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 MITFO75030 526 aaPredicted RBP6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 CIB2O75838 187 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 CFL1P23528 166 aaKnown RBP6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 GATA3P23771 443 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 CFHR2P36980 270 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 SLC6A9P48067 706 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 MMP16P51512 607 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 PRKXP51817 358 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 MVKQ03426 396 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 APOFQ13790 326 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 OR8B8Q15620 311 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 KLHL12Q53G59 568 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 FAM76BQ5HYJ3 339 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 SLC25A30Q5SVS4 291 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 NXNL2Q5VZ03 156 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 ZFP1Q6P2D0 407 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 Q6ZSR3 168 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 CCDC121Q6ZUS5 278 aa6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 MEPCEQ7L2J0 689 aaKnown RBP6.88□□□□□ -1.31
HDGFL3-205ENST00000568129 PEG10Q86TG7 708 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms