RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 TACSTD2P09758 323 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 SBK2P0C263 348 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 ANPEPP15144 967 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 PEX2P28328 305 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 HTR1FP30939 366 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 RBMXP38159 391 aaKnown RBP8.31□□□□□ -1.08
CLK3-220ENST00000567992 CRYBB2P43320 205 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 SLC15A1P46059 708 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 ZNF121P58317 390 aaPredicted RBP8.31□□□□□ -1.08
CLK3-220ENST00000567992 PSMA6P60900 246 aaKnown RBP8.31□□□□□ -1.08
CLK3-220ENST00000567992 CDC42P60953 191 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 ROM1Q03395 351 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 TAF13Q15543 124 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 TRIP10Q15642 601 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 ZMAT1Q5H9K5 638 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 SLC25A30Q5SVS4 291 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 ZBTB49Q6ZSB9 765 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 USP51Q70EK9 711 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 ZNF283Q8N7M2 679 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 THEM6Q8WUY1 208 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 OR8B4Q96RC9 309 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 SLC30A2Q9BRI3 323 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
CLK3-220ENST00000567992 TTTY10Q9BZA0 68 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 CHODLQ9H9P2 273 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 SAP30LQ9HAJ7 183 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 RNPEPL1Q9HAU8 725 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 ZNF275Q9NSD4 429 aaPredicted RBP8.31□□□□□ -1.08
CLK3-220ENST00000567992 LAMP5Q9UJQ1 280 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 LRP12Q9Y561 859 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 ORC6Q9Y5N6 252 aa8.31□□□□□ -1.08
CLK3-220ENST00000567992 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.3□□□□□ -1.08
CLK3-220ENST00000567992 SONP18583 2426 aaKnown RBP8.3□□□□□ -1.08
CLK3-220ENST00000567992 DYSFO75923 2080 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 IGHV1-69-2A0A0G2JMI3 117 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 hCG_38984A0A1B0GV85 526 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 CD300LBA8K4G0 201 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 H0YL77 283 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 WNT9BO14905 357 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 CDC14BO60729 498 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 ENTPD6O75354 484 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 SRSF10O75494 262 aaKnown RBP8.3□□□□□ -1.08
CLK3-220ENST00000567992 APOL3O95236 402 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 ANXA2P07355 339 aaKnown RBP8.3□□□□□ -1.08
CLK3-220ENST00000567992 H2BFMP0C1H6 154 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 USF1P22415 310 aaPredicted RBP8.3□□□□□ -1.08
CLK3-220ENST00000567992 HSD11B1P28845 292 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 IL2RGP31785 369 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 SNRPGP62308 76 aaKnown RBP8.3□□□□□ -1.08
CLK3-220ENST00000567992 MALLQ13021 153 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 TMEM249Q2WGJ8 235 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 LPCAT4Q643R3 524 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 CLEC9AQ6UXN8 241 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 Q71RC1 249 aaPredicted RBP8.3□□□□□ -1.08
CLK3-220ENST00000567992 FAM57BQ71RH2 274 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 PGAP1Q75T13 922 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 SSX6Q7RTT6 188 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 SLC35F2Q8IXU6 374 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 ENTHD1Q8IYW4 607 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 BHLHE23Q8NDY6 225 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 OR2Z1Q8NG97 314 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 OR10AD1Q8NGE0 317 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 OR51G2Q8NGK0 314 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 TRUB1Q8WWH5 349 aaKnown RBP8.3□□□□□ -1.08
CLK3-220ENST00000567992 SGK3Q96BR1 496 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 ELMOD3Q96FG2 381 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 DIRC2Q96SL1 478 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 SOX7Q9BT81 388 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 CLN6Q9NWW5 311 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 FAM206AQ9NX38 181 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 DCAF16Q9NXF7 216 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 AASSQ9UDR5 926 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 WARS2Q9UGM6 360 aaKnown RBP8.3□□□□□ -1.08
CLK3-220ENST00000567992 NAV3Q8IVL0 2385 aa8.3□□□□□ -1.08
CLK3-220ENST00000567992 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 LRP5LA4QPB2 252 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 J3QRE1 110 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 PSMD9O00233 223 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 CASQ2O14958 399 aaPredicted RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 SLC16A6O15403 523 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 MAGEB4O15481 346 aaPredicted RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 XRCC2O43543 280 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 APOC1P02654 83 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 IGHV4-31P0DP07 118 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 SELEP16581 610 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 CXCR4P61073 352 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 TNFAIP6P98066 277 aaPredicted RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 FAM3AP98173 230 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 MFGE8Q08431 387 aaPredicted RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 TMED1Q13445 227 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 OCLNQ16625 522 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 OGFRL1Q5TC84 451 aaPredicted RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 DEGS2Q6QHC5 323 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 ZNF322Q6U7Q0 402 aaPredicted RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 MRPL21Q7Z2W9 205 aaKnown RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 KRT77Q7Z794 578 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 ZNF679Q8IYX0 411 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 ZNF540Q8NDQ6 660 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 OR8B12Q8NGG6 310 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms