RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CHID1Q9BWS9 393 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 TSSK6Q9BXA6 273 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 TMPRSS13Q9BYE2 586 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 NMNAT2Q9BZQ4 307 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 SLC22A4Q9H015 551 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 OPA3Q9H6K4 179 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 WDR76Q9H967 626 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 PATZ1Q9HBE1 687 aaKnown RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 CMC2Q9NRP2 79 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 TMEM100Q9NV29 134 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 ARMC1Q9NVT9 282 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 DCAF16Q9NXF7 216 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 VNN3Q9NY84 501 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 TAS2R1Q9NYW7 299 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 UBAP1Q9NZ09 502 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 LRCH1Q9Y2L9 728 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 POLR3KQ9Y2Y1 108 aaPredicted RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 NOP16Q9Y3C1 178 aaKnown RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 COMMD3-BMI1R4GMX3 469 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 WNK2Q9Y3S1 2297 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 FBN3Q75N90 2809 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 DHRS12A0PJE2 317 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 TVP23AA6NH52 213 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 AQP12BA6NM10 295 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 LRRC30A6NM36 301 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 RIIAD1A6NNX1 92 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 CEACAM18A8MTB9 384 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 A8MXK9 166 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ZNF878C9JN71 531 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 F5H0A9 414 aaPredicted RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 F5H5P2 479 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 H0YL77 283 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 H3BN98 237 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ZNF593O00488 134 aaPredicted RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 GNGT2O14610 69 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ACOT8O14734 319 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 GYG2O15488 501 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 GMDSO60547 372 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SOX14O95416 240 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 CST1P01037 141 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 HLA-DPB1P04440 258 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 GYPBP06028 91 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SPARCP09486 303 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 CLUP10909 449 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 PSKH1P11801 424 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 IRF2P14316 349 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SPI1P17947 270 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 EPHA1P21709 976 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 PAICSP22234 425 aaKnown RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 ZFP36P26651 326 aaKnown RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 GRK5P34947 590 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 CD200P41217 278 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SLC15A1P46059 708 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SLC6A9P48067 706 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 RAD23AP54725 363 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 HILS1P60008 231 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 GRB2P62993 217 aaKnown RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 ZNF92Q03936 586 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 TAF13Q15543 124 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 OR8G1Q15617 311 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SNAI3Q3KNW1 292 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 DNAL1Q4LDG9 190 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ESCO2Q56NI9 601 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 LYPD4Q6UWN0 246 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 RHOUQ7L0Q8 258 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ZNF771Q7L3S4 317 aaPredicted RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 TRPM8Q7Z2W7 1104 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 MRPL21Q7Z2W9 205 aaKnown RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 DCXRQ7Z4W1 244 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 NAA40Q86UY6 237 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 MOGAT3Q86VF5 341 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 KLBQ86Z14 1044 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 AQP12AQ8IXF9 295 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ADGRG5Q8IZF4 528 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SEMA6DQ8NFY4 1073 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 OR51L1Q8NGJ5 315 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 OR10S1Q8NGN2 331 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 OR9Q1Q8NGQ5 310 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 OR6K6Q8NGW6 343 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 OR4Q3Q8NH05 313 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ZNF420Q8TAQ5 688 aaPredicted RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 Q8TCH9 128 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 BCAS4Q8TDM0 211 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 GIPC3Q8TF64 312 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 CANT1Q8WVQ1 401 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SPRYD4Q8WW59 207 aaPredicted RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 ZNRF4Q8WWF5 429 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ERGIC1Q969X5 290 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SLCO4A1Q96BD0 722 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 SLAMF6Q96DU3 332 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 CLPTM1LQ96KA5 538 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 JMJD8Q96S16 334 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 FEVQ99581 238 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 KCNJ15Q99712 375 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 COPS4Q9BT78 406 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 ADAT1Q9BUB4 502 aaKnown RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 SUCNR1Q9BXA5 334 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 TOR3AQ9H497 397 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 C7orf69Q9H7B7 122 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 YY1AP1Q9H869 796 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms