RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	PPIAL4E	A0A075B759	164 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	LOC105371242	A0A075B767	164 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	PPIAL4C	A0A0B4J2A2	164 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635		A0A1B0GWJ7	208 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	DHRS12	A0PJE2	317 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	ARRDC5	A6NEK1	342 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	LRRC30	A6NM36	301 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	PPIAL4D	F5H284	164 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635		F5H5P2	479 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635		H3BN98	237 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635		M0R135	149 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	FOXH1	O75593	365 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	AVP	P01185	164 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	HLA-DPB1	P04440	258 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	GYPB	P06028	91 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SPARC	P09486	303 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	PPIAL4F	P0DN26	164 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	CLU	P10909	449 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF3	P17036	446 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SPI1	P17947	270 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	CPT2	P23786	658 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZFP36	P26651	326 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	POU1F1	P28069	291 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	OTX1	P32242	354 aa	Predicted RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	GRK5	P34947	590 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	RBMX	P38159	391 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	MDH2	P40926	338 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	RPS27	P42677	84 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC6A9	P48067	706 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	BTG1	P62324	171 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SRSF2	Q01130	221 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	HNRNPA0	Q13151	305 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZMYND11	Q15326	602 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	PCK2	Q16822	640 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	C1orf146	Q5VVC0	180 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	LYPD4	Q6UWN0	246 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	DRAM2	Q6UX65	266 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	C1orf229	Q6ZS94	237 aa	Predicted RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	PGAP1	Q75T13	922 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	MRPL21	Q7Z2W9	205 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	TMEM179B	Q7Z7N9	219 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SPATA24	Q86W54	205 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	CELF2-AS1	Q8N7Q2	184 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR10AD1	Q8NGE0	317 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR6K6	Q8NGW6	343 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	NANP	Q8TBE9	248 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	TEX47	Q8TBZ9	253 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SPRYD4	Q8WW59	207 aa	Predicted RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	OTULIN	Q96BN8	352 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	PPP1R14B	Q96C90	147 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLAMF6	Q96DU3	332 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF799	Q96GE5	643 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SIGLEC11	Q96RL6	698 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	KCNJ15	Q99712	375 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	NIPSNAP1	Q9BPW8	284 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	COPS4	Q9BT78	406 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	C19orf24	Q9BVV8	132 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	REPIN1	Q9BWE0	567 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	TMPRSS13	Q9BYE2	586 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC22A4	Q9H015	551 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	VCX	Q9H320	206 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	VCX3B	Q9H321	246 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	C7orf69	Q9H7B7	122 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	DCLRE1B	Q9H816	532 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF556	Q9HAH1	456 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	RNPEPL1	Q9HAU8	725 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	PATZ1	Q9HBE1	687 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	VCX3A	Q9NNX9	186 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	CMC2	Q9NRP2	79 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	DDX28	Q9NUL7	540 aa	Known RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	PDP1	Q9P0J1	537 aa	Predicted RBP	5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	POMP	Q9Y244	141 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	COMMD3-BMI1	R4GMX3	469 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	DNHD1	Q96M86	4753 aa		5.82	□□□□□ -1.48
SF3B3-209	ENST00000567635	IGHV3-64D	A0A0J9YX35	117 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	GGT3P	A6NGU5	568 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	FAM183A	A6NL82	134 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	CD300LB	A8K4G0	201 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF878	C9JN71	531 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	MLNR	O43193	412 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	GMDS	O60547	372 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	FKBP6	O75344	327 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	E2F6	O75461	281 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	FSTL3	O95633	263 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	HMGN1	P05114	100 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	WNT2	P09544	360 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	PSKH1	P11801	424 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	ANXA8	P13928	327 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	PAICS	P22234	425 aa	Known RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	PRKACG	P22612	351 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	CA6	P23280	308 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	GSTT1	P30711	240 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	PMEL	P40967	661 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	GATA4	P43694	442 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC15A1	P46059	708 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	MMP16	P51512	607 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	PRKX	P51817	358 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	GRB2	P62993	217 aa	Known RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	CDK5	Q00535	292 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF92	Q03936	586 aa		5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms