RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ARPC2O15144 300 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 TMPRSS2O15393 492 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 ATP8B1O43520 1251 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 IGHV4-38-2P0DP08 117 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 OTX1P32242 354 aaPredicted RBP23.09■■□□□ 1.29
UBFD1-206ENST00000566669 PSMB10P40306 273 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 PMELP40967 661 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 SLC9A3R2Q15599 337 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 PGBD2Q6P3X8 592 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 CPLX4Q7Z7G2 160 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 ZDHHC21Q8IVQ6 265 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 C1orf147Q96MC9 270 aaPredicted RBP23.09■■□□□ 1.29
UBFD1-206ENST00000566669 TRIM15Q9C019 465 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 PRDM13Q9H4Q3 707 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 MRPL22Q9NWU5 206 aaKnown RBP23.09■■□□□ 1.29
UBFD1-206ENST00000566669 IL20Q9NYY1 176 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 ERVK-18Q9QC07 812 aa23.09■■□□□ 1.29
UBFD1-206ENST00000566669 TRAV40A0A0B4J280 105 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 FAM20BO75063 409 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 BLVRAP53004 296 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 CLEC12AQ5QGZ9 265 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 GPR157Q5UAW9 335 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 C16orf89Q6UX73 402 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 FITM2Q8N6M3 262 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 MAP6Q96JE9 813 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 CDRT15Q96T59 188 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 ADAT1Q9BUB4 502 aaKnown RBP23.08■■□□□ 1.29
UBFD1-206ENST00000566669 SLITRK2Q9H156 845 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 BAIAP2Q9UQB8 552 aa23.08■■□□□ 1.29
UBFD1-206ENST00000566669 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.07■■□□□ 1.28
UBFD1-206ENST00000566669 A0A1B0GUS0 222 aa23.07■■□□□ 1.28
UBFD1-206ENST00000566669 RBMXP38159 391 aaKnown RBP23.07■■□□□ 1.28
UBFD1-206ENST00000566669 MNAT1P51948 309 aa23.07■■□□□ 1.28
UBFD1-206ENST00000566669 SLC35F1Q5T1Q4 408 aa23.07■■□□□ 1.28
UBFD1-206ENST00000566669 C16orf87Q6PH81 154 aa23.07■■□□□ 1.28
UBFD1-206ENST00000566669 DUX5Q96PT3 197 aa23.07■■□□□ 1.28
UBFD1-206ENST00000566669 NOX4Q9NPH5 578 aa23.07■■□□□ 1.28
UBFD1-206ENST00000566669 TRAV38-1A0A0B4J264 116 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 IGHV3-64DA0A0J9YX35 117 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 GGT3PA6NGU5 568 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 LGALS8O00214 317 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 BHLHE40O14503 412 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 CA6P23280 308 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 DDOSTP39656 456 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 ZNF362Q5T0B9 420 aaPredicted RBP23.06■■□□□ 1.28
UBFD1-206ENST00000566669 NAA40Q86UY6 237 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 FN3KQ9H479 309 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 SP140LQ9H930 580 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 UNKLQ9H9P5 680 aaKnown RBP23.06■■□□□ 1.28
UBFD1-206ENST00000566669 C14orf119Q9NWQ9 140 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 TAGLN3Q9UI15 199 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 MEGF8Q7Z7M0 2845 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 PKD1L1Q8TDX9 2849 aa23.06■■□□□ 1.28
UBFD1-206ENST00000566669 FMO3P31513 532 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 ZNF841Q6ZN19 808 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 RASSF6Q6ZTQ3 369 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 PNLDC1Q8NA58 520 aaKnown RBP23.05■■□□□ 1.28
UBFD1-206ENST00000566669 OR10S1Q8NGN2 331 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 ZDHHC16Q969W1 377 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 DDOQ99489 341 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 COPS4Q9BT78 406 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 FAM107BQ9H098 131 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 UFSP2Q9NUQ7 469 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 MMP24Q9Y5R2 645 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 LYVE1Q9Y5Y7 322 aa23.05■■□□□ 1.28
UBFD1-206ENST00000566669 DOCK11Q5JSL3 2073 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 TNFRSF11BO00300 401 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 P2RY10O00398 339 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 XRCC2O43543 280 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 APOC1P02654 83 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 SLC15A1P46059 708 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 FGF12P61328 243 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 TAF13Q15543 124 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 PCK2Q16822 640 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 TEX30Q5JUR7 227 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 FAM201AQ5SY85 155 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 LNX2Q8N448 690 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 TMEM86BQ8N661 226 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 FAM71F1Q96KD3 344 aaPredicted RBP23.04■■□□□ 1.28
UBFD1-206ENST00000566669 TECTBQ96PL2 329 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 KCNJ15Q99712 375 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 MMADHCQ9H3L0 296 aaPredicted RBP23.04■■□□□ 1.28
UBFD1-206ENST00000566669 EGLN3Q9H6Z9 239 aa23.04■■□□□ 1.28
UBFD1-206ENST00000566669 DCTN3O75935 186 aa23.03■■□□□ 1.28
UBFD1-206ENST00000566669 ENTPD1P49961 510 aa23.03■■□□□ 1.28
UBFD1-206ENST00000566669 ZNF92Q03936 586 aa23.03■■□□□ 1.28
UBFD1-206ENST00000566669 MPPED2Q15777 294 aa23.03■■□□□ 1.28
UBFD1-206ENST00000566669 PRAMEF6Q5VXH4 476 aa23.03■■□□□ 1.28
UBFD1-206ENST00000566669 DCXRQ7Z4W1 244 aa23.03■■□□□ 1.28
UBFD1-206ENST00000566669 COMMD3-BMI1R4GMX3 469 aa23.03■■□□□ 1.28
UBFD1-206ENST00000566669 SRRM5B3KS81 715 aa23.02■■□□□ 1.28
UBFD1-206ENST00000566669 ZNF879B4DU55 563 aa23.02■■□□□ 1.28
UBFD1-206ENST00000566669 ZNF878C9JN71 531 aa23.02■■□□□ 1.28
UBFD1-206ENST00000566669 ECDO95905 644 aaPredicted RBP23.02■■□□□ 1.28
UBFD1-206ENST00000566669 PYCR1P32322 319 aa23.02■■□□□ 1.28
UBFD1-206ENST00000566669 GRK5P34947 590 aa23.02■■□□□ 1.28
UBFD1-206ENST00000566669 SLC25A1P53007 311 aa23.02■■□□□ 1.28
UBFD1-206ENST00000566669 RPL15P61313 204 aaKnown RBP23.02■■□□□ 1.28
UBFD1-206ENST00000566669 GRB2P62993 217 aaKnown RBP23.02■■□□□ 1.28
UBFD1-206ENST00000566669 SNAI3Q3KNW1 292 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms