RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 AWAT1Q58HT5 328 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 LYPD2Q6UXB3 125 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 MRPL21Q7Z2W9 205 aaKnown RBP15.3■□□□□ 0.04
USB1-213ENST00000566292 LNX2Q8N448 690 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 FITM2Q8N6M3 262 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 C3orf56Q8N813 242 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 AQP11Q8NBQ7 271 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 C19orf18Q8NEA5 215 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 OR4Q3Q8NH05 313 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 OR2AE1Q8NHA4 323 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 SPRYD4Q8WW59 207 aaPredicted RBP15.3■□□□□ 0.04
USB1-213ENST00000566292 SPTSSAQ969W0 71 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 DUX5Q96PT3 197 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 TSSK6Q9BXA6 273 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 UFSP2Q9NUQ7 469 aa15.3■□□□□ 0.04
USB1-213ENST00000566292 DNAJC9-AS1A6NH13 148 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 CD300LBA8K4G0 201 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 GYPBP06028 91 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 IGHV4-38-2P0DP08 117 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 CA6P23280 308 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 CRMP1Q14194 572 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 PCK2Q16822 640 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 GLYATL3Q5SZD4 288 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 RBMS3Q6XE24 437 aaKnown RBP15.29■□□□□ 0.04
USB1-213ENST00000566292 DCXRQ7Z4W1 244 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 ZNF511Q8NB15 262 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 OR8B3Q8NGG8 313 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 RAB40AQ8WXH6 277 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 ERGIC1Q969X5 290 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 OR8B2Q96RD0 313 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 NMNAT2Q9BZQ4 307 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 MAGIXQ9H6Y5 334 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 TBC1D23Q9NUY8 699 aa15.29■□□□□ 0.04
USB1-213ENST00000566292 SOX21Q9Y651 276 aaPredicted RBP15.29■□□□□ 0.04
USB1-213ENST00000566292 IGHV3OR16-10A0A075B7F0 116 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 B2RBV5 119 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 SOX14O95416 240 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 PPIAL4GP0DN37 164 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 CLUP10909 449 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 IRF2P14316 349 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 PITPNBP48739 271 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 ENTPD1P49961 510 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 MS4A2Q01362 244 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 OR8G1Q15617 311 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 LCN8Q6JVE9 175 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 DRAM2Q6UX65 266 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 BTNL3Q6UXE8 466 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 LRRN1Q6UXK5 716 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 ZNF841Q6ZN19 808 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 PARP8Q8N3A8 854 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 OR11L1Q8NGX0 322 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 UPRTQ96BW1 309 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 PLEKHA8Q96JA3 519 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 ARMC1Q9NVT9 282 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 U3KQV3 271 aa15.28■□□□□ 0.04
USB1-213ENST00000566292 KIR2DS1A0A191URI9 304 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 PTBP3O95758 552 aaKnown RBP15.27■□□□□ 0.04
USB1-213ENST00000566292 SPARCP09486 303 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 HKR1P10072 659 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 SPI1P17947 270 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 EGR1P18146 543 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 PRTN3P24158 256 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 FMO3P31513 532 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 PRKXP51817 358 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 MNAT1P51948 309 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 SLC25A1P53007 311 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 MICAQ29983 383 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 WDR25Q64LD2 544 aaPredicted RBP15.27■□□□□ 0.04
USB1-213ENST00000566292 OR2T5Q6IEZ7 315 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 DCDC5Q6ZRR9 648 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 NLRC3Q7RTR2 1065 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 OR2T29Q8NH02 315 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 SLAMF6Q96DU3 332 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 NUDT16L1Q9BRJ7 211 aaKnown RBP15.27■□□□□ 0.04
USB1-213ENST00000566292 COPS4Q9BT78 406 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 ADAT1Q9BUB4 502 aaKnown RBP15.27■□□□□ 0.04
USB1-213ENST00000566292 DGCR6LQ9BY27 220 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 MS4A7Q9GZW8 240 aaPredicted RBP15.27■□□□□ 0.04
USB1-213ENST00000566292 SLC22A4Q9H015 551 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 CLN8Q9UBY8 286 aa15.27■□□□□ 0.04
USB1-213ENST00000566292 GGT3PA6NGU5 568 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 ZNF593O00488 134 aaPredicted RBP15.26■□□□□ 0.03
USB1-213ENST00000566292 PLATP00750 562 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 SLC2A1P11166 492 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 PSMB10P40306 273 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 BAMBIQ13145 260 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 TRIM25Q14258 630 aaKnown RBP15.26■□□□□ 0.03
USB1-213ENST00000566292 TEX30Q5JUR7 227 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 LINC01590Q5TEZ4 76 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 C9orf139Q6ZV77 190 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 DHFR2Q86XF0 187 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 ARHGAP24Q8N264 748 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 OR2T33Q8NG76 320 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 ZMYND19Q96E35 227 aaPredicted RBP15.26■□□□□ 0.03
USB1-213ENST00000566292 NSL1Q96IY1 281 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 KCNJ15Q99712 375 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 MUC13Q9H3R2 512 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 CENPMQ9NSP4 180 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 RNF7Q9UBF6 113 aa15.26■□□□□ 0.03
USB1-213ENST00000566292 BAIAP2Q9UQB8 552 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms