RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 PRR32B1ATL7 298 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 NCR1O76036 304 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 IGHV1-46P01743 117 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 ANXA2P07355 339 aaKnown RBP17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 CD55P08174 381 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 ANOS1P23352 680 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 PDLIM4P50479 330 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF92Q03936 586 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 CDK5R2Q13319 367 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 TNK1Q13470 666 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 GLYATL3Q5SZD4 288 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF691Q5VV52 312 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 OR2T2Q6IF00 324 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 MRPL21Q7Z2W9 205 aaKnown RBP17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 DHRSXQ8N5I4 330 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 RFLNBQ8N5W9 214 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 OR8G5Q8NG78 346 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 UBASH3BQ8TF42 649 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 GTF3AQ92664 365 aaKnown RBP17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 COX4I2Q96KJ9 171 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 RGCCQ9H4X1 137 aa17.94■□□□□ 0.46
SHCBP1-205ENST00000566016 TRIM64A6NGJ6 449 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 TRIM64BA6NI03 449 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 ACOD1A6NK06 481 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 H0YAE9 185 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 HPXP02790 462 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 CD99P14209 185 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 SLC25A16P16260 332 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 CFL1P23528 166 aaKnown RBP17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 GIFP27352 417 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 ATP6V1E1P36543 226 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 MAGEB1P43366 347 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 ACTC1P68032 377 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 ACTA1P68133 377 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 ADARB1P78563 741 aaKnown RBP17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 IL18R1Q13478 541 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 USP51Q70EK9 711 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 SETD9Q8NE22 299 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 MSL2Q9HCI7 577 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF391Q9UJN7 358 aa17.93■□□□□ 0.46
SHCBP1-205ENST00000566016 IGHV4-30-2A0A087WSY4 118 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 MMP16P51512 607 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 RIDAP52758 137 aaKnown RBP17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 CCL8P80075 99 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 RIPK1Q13546 671 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 Q6ZR03 302 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 FAM57BQ71RH2 274 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 OR2AE1Q8NHA4 323 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 CYGBQ8WWM9 190 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 C18orf12Q96KH6 178 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 SLC30A2Q9BRI3 323 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 ADI1Q9BV57 179 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 OR10A2Q9H208 303 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 SAP30LQ9HAJ7 183 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 IKZF2Q9UKS7 526 aa17.92■□□□□ 0.46
SHCBP1-205ENST00000566016 ABCA1O95477 2261 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 YLPM1P49750 1951 aaKnown RBP17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 A0A1W2PQL4 384 aaPredicted RBP17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 C5orf63A6NC05 138 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 H0YJX3 145 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 J3QRE1 110 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 SPRY3O43610 288 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF91Q05481 1191 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 TIGD6Q17RP2 521 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF829Q3KNS6 432 aaPredicted RBP17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF540Q8NDQ6 660 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 OR13G1Q8NGZ3 307 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 APH1BQ8WW43 257 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 RDH5Q92781 318 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 RNFT2Q96EX2 444 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 PIMREGQ9BSJ6 248 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 EGLN1Q9GZT9 426 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 MOB1AQ9H8S9 216 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 DECR2Q9NUI1 292 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 FAM206AQ9NX38 181 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 PCDHGB1Q9Y5G3 927 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 HSPE1-MOB4S4R3N1 261 aa17.91■□□□□ 0.46
SHCBP1-205ENST00000566016 CD300LBA8K4G0 201 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 VWC2LB2RUY7 222 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 H7C1Q1 480 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 TBX1O43435 398 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 SULT1C4O75897 302 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 APOL3O95236 402 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 DBTP11182 482 aaKnown RBP17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 ACHEP22303 614 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 TNFSF4P23510 183 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 DDOSTP39656 456 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 CAPGP40121 348 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF684Q5T5D7 378 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 OR10H4Q8NGA5 316 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 ITFG2Q969R8 447 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 ELMOD3Q96FG2 381 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 PGAM5Q96HS1 289 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 REG4Q9BYZ8 158 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 SLC22A4Q9H015 551 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 CHODLQ9H9P2 273 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 MRPS18AQ9NVS2 196 aaKnown RBP17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 ZNF319Q9P2F9 582 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 AASSQ9UDR5 926 aa17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 EXOGQ9Y2C4 368 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms