RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CX3CR1P49238 355 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 LMO4P61968 165 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 PTGES3Q15185 160 aaKnown RBP16.79■□□□□ 0.28
CMTM3-211ENST00000565922 CR1LQ2VPA4 569 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 SNAI3Q3KNW1 292 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 TMEM236Q5W0B7 351 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 OTOSQ8NHW6 89 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 MEGF10Q96KG7 1140 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 OSBPL10Q9BXB5 764 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 TMEFF2Q9UIK5 374 aaPredicted RBP16.79■□□□□ 0.28
CMTM3-211ENST00000565922 JMJD1CQ15652 2540 aa16.79■□□□□ 0.28
CMTM3-211ENST00000565922 TRAV20A0A0B4J274 112 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 A0A1B0GWJ7 208 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 GGT3PA6NGU5 568 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 EBAG9O00559 213 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 IGHV2-5P01817 119 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 ANXA2P07355 339 aaKnown RBP16.78■□□□□ 0.28
CMTM3-211ENST00000565922 H2BFMP0C1H6 154 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 SRD5A1P18405 259 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 SPRNQ5BIV9 151 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 KDM4DQ6B0I6 523 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 SPATC1Q76KD6 591 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 AMIGO2Q86SJ2 522 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-211ENST00000565922 C10orf67Q8IYJ2 551 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 SPICQ8N5J4 248 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 CELF2-AS1Q8N7Q2 184 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 OR52H1Q8NGJ2 320 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 LRTOMTQ8WZ04 291 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 TMEM186Q96B77 213 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 CENPNQ96H22 339 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-211ENST00000565922 REPIN1Q9BWE0 567 aaKnown RBP16.78■□□□□ 0.28
CMTM3-211ENST00000565922 GCM1Q9NP62 436 aa16.78■□□□□ 0.28
CMTM3-211ENST00000565922 LRRC30A6NM36 301 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 CD300LBA8K4G0 201 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 FAM157AC9JC47 383 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 MLNRO43193 412 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 SELENOFO60613 162 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 SLC2A5P22732 501 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 CFL1P23528 166 aaKnown RBP16.77■□□□□ 0.28
CMTM3-211ENST00000565922 DDOSTP39656 456 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 ZNF92Q03936 586 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 APOFQ13790 326 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 GLYATL3Q5SZD4 288 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 C1orf87Q8N0U7 546 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 KLHL36Q8N4N3 616 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 THEM6Q8WUY1 208 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 ERGIC1Q969X5 290 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 NIPAL2Q9H841 368 aa16.77■□□□□ 0.28
CMTM3-211ENST00000565922 TBX1O43435 398 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 IGHV2-70P01814 119 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 SLC2A1P11166 492 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 OPRL1P41146 370 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 GATA4P43694 442 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 MMP16P51512 607 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 ACTR3P61158 418 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 BTG1P62324 171 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 MZT1Q08AG7 82 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 TIGD6Q17RP2 521 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 ZNF181Q2M3W8 571 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 TMEM155Q4W5P6 130 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 ZFP1Q6P2D0 407 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 SLC16A9Q7RTY1 509 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 MUC20Q8N307 709 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-211ENST00000565922 TEX29Q8N6K0 151 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 OR2AE1Q8NHA4 323 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 YIPF3Q9GZM5 350 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 MRPL15Q9P015 296 aaKnown RBP16.76■□□□□ 0.27
CMTM3-211ENST00000565922 H2AFY2Q9P0M6 372 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-211ENST00000565922 LAMP5Q9UJQ1 280 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 PCDHB10Q9UN67 800 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 N6AMT1Q9Y5N5 214 aa16.76■□□□□ 0.27
CMTM3-211ENST00000565922 ZAR1LA6NP61 321 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 F5H5P2 479 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 H0YL77 283 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 GMDSO60547 372 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 IRF2P14316 349 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 CD200P41217 278 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 NAA10P41227 235 aaPredicted RBP16.75■□□□□ 0.27
CMTM3-211ENST00000565922 OR8G1Q15617 311 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 SNCBQ16143 134 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 SLX4IPQ5VYV7 408 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 KCTD18Q6PI47 426 aaPredicted RBP16.75■□□□□ 0.27
CMTM3-211ENST00000565922 KLBQ86Z14 1044 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 SPERTQ8NA61 448 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 BBS1Q8NFJ9 593 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 SPSB4Q96A44 273 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 SIGLEC11Q96RL6 698 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 ADAT1Q9BUB4 502 aaKnown RBP16.75■□□□□ 0.27
CMTM3-211ENST00000565922 OR10A2Q9H208 303 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 SEMA6AQ9H2E6 1030 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 RGCCQ9H4X1 137 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 LPAR2Q9HBW0 351 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 UBAP1Q9NZ09 502 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 OAZ3Q9UMX2 235 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 TMEM14AQ9Y6G1 99 aa16.75■□□□□ 0.27
CMTM3-211ENST00000565922 DOCK11Q5JSL3 2073 aa16.74■□□□□ 0.27
CMTM3-211ENST00000565922 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-211ENST00000565922 SLC22A31A6NKX4 558 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms