RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 FBXO9Q9UK97 447 aaPredicted RBP22.29■■□□□ 1.16
NME3-208ENST00000565379 H7C1Q1 480 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 MMP16P51512 607 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 SELENOVP59797 346 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 MALLQ13021 153 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 MRPL28Q13084 256 aaKnown RBP22.28■■□□□ 1.16
NME3-208ENST00000565379 ZNF718Q3SXZ3 478 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 RFPL4BQ6ZWI9 263 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 SSX6Q7RTT6 188 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 FBXL14Q8N1E6 418 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 YIPF7Q8N8F6 280 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 ALG8Q9BVK2 526 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 MOB1AQ9H8S9 216 aa22.28■■□□□ 1.16
NME3-208ENST00000565379 PRR32B1ATL7 298 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 NGFP01138 241 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 SOD3P08294 240 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 EVX1P49640 407 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 VHLLQ6RSH7 139 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 AHSA2Q719I0 299 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 ZNF786Q8N393 782 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 MRPL24Q96A35 216 aaKnown RBP22.27■■□□□ 1.16
NME3-208ENST00000565379 GSX2Q9BZM3 304 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 OR51B6Q9H340 312 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 OPA3Q9H6K4 179 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 LAMP3Q9UQV4 416 aa22.27■■□□□ 1.16
NME3-208ENST00000565379 RTTNQ86VV8 2226 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 TMEM269A0A1B0GVZ9 245 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 PSMD9O00233 223 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 SMAD7O15105 426 aaKnown RBP22.26■■□□□ 1.15
NME3-208ENST00000565379 XRCC2O43543 280 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 GPRIN2O60269 458 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 ANXA2P07355 339 aaKnown RBP22.26■■□□□ 1.15
NME3-208ENST00000565379 ZNF250P15622 560 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 CRHBPP24387 322 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 GCH1P30793 250 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 TTKP33981 857 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 SERPINF1P36955 418 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 ZNF121P58317 390 aaPredicted RBP22.26■■□□□ 1.15
NME3-208ENST00000565379 EFNB3Q15768 340 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 ADIPOQQ15848 244 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 MOGQ16653 247 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 AGAP6Q5VW22 663 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 RNLSQ5VYX0 342 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 MBNL2Q5VZF2 373 aaKnown RBP22.26■■□□□ 1.15
NME3-208ENST00000565379 TMPRSS11AQ6ZMR5 421 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 LHFPL3Q86UP9 236 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 MUC15Q8N387 334 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 MARS2Q96GW9 593 aaKnown RBP22.26■■□□□ 1.15
NME3-208ENST00000565379 TTTY10Q9BZA0 68 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 OR10A2Q9H208 303 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 RGCCQ9H4X1 137 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 ZNF391Q9UJN7 358 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 GNG8Q9UK08 70 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 STARD10Q9Y365 291 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 CAB39Q9Y376 341 aaPredicted RBP22.26■■□□□ 1.15
NME3-208ENST00000565379 R4GMQ9 66 aa22.26■■□□□ 1.15
NME3-208ENST00000565379 PTGES3LE9PB15 166 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 OR4A8P0C604 315 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 CFL1P23528 166 aaKnown RBP22.25■■□□□ 1.15
NME3-208ENST00000565379 SLC35A2P78381 396 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 LIPNQ5VXI9 398 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 PRSS45Q7RTY3 260 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 NAA40Q86UY6 237 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 SYNPRQ8TBG9 265 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 SLC25A40Q8TBP6 338 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 ITFG2Q969R8 447 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 COX4I2Q96KJ9 171 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 ZNF649Q9BS31 505 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 PLK3Q9H4B4 646 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 DUSP21Q9H596 190 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 UBAP1Q9NZ09 502 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 GPR160Q9UJ42 338 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 SNX5Q9Y5X3 404 aa22.25■■□□□ 1.15
NME3-208ENST00000565379 B9A039 149 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 CDK1P06493 297 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 HEXAP06865 529 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 LIMS3P0CW19 117 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 LIMS4P0CW20 117 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 BMP4P12644 408 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 PRSS57Q6UWY2 283 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 FBXW12Q6X9E4 464 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 DTX2Q86UW9 622 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 KLHL36Q8N4N3 616 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 KLF14Q8TD94 323 aaPredicted RBP22.24■■□□□ 1.15
NME3-208ENST00000565379 PGAM5Q96HS1 289 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 RHNO1Q9BSD3 238 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 OR2J1Q9GZK6 312 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 ZNF701Q9NV72 531 aaPredicted RBP22.24■■□□□ 1.15
NME3-208ENST00000565379 FAM206AQ9NX38 181 aa22.24■■□□□ 1.15
NME3-208ENST00000565379 DANCRP0C864 163 aa22.23■■□□□ 1.15
NME3-208ENST00000565379 RAC2P15153 192 aa22.23■■□□□ 1.15
NME3-208ENST00000565379 KLF3P57682 345 aaPredicted RBP22.23■■□□□ 1.15
NME3-208ENST00000565379 TP53I3Q53FA7 332 aa22.23■■□□□ 1.15
NME3-208ENST00000565379 FAM57BQ71RH2 274 aa22.23■■□□□ 1.15
NME3-208ENST00000565379 OR52N1Q8NH53 320 aa22.23■■□□□ 1.15
NME3-208ENST00000565379 C4orf36Q96KX1 117 aa22.23■■□□□ 1.15
NME3-208ENST00000565379 CBLN4Q9NTU7 201 aa22.23■■□□□ 1.15
NME3-208ENST00000565379 NUFIP1Q9UHK0 495 aaKnown RBP22.23■■□□□ 1.15
NME3-208ENST00000565379 ERGIC3Q9Y282 383 aa22.23■■□□□ 1.15
NME3-208ENST00000565379 PCDHGB5Q9Y5G0 923 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms