RNA–Protein interactions for RNA: ENST00000565354.5

CLN3-217, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 759 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-217ENST00000565354 MRPL21Q7Z2W9 205 aaKnown RBP14.74□□□□□ -0.05
CLN3-217ENST00000565354 OR10H4Q8NGA5 316 aa14.74□□□□□ -0.05
CLN3-217ENST00000565354 SORCS2Q96PQ0 1159 aa14.74□□□□□ -0.05
CLN3-217ENST00000565354 TBX5Q99593 518 aa14.74□□□□□ -0.05
CLN3-217ENST00000565354 ADI1Q9BV57 179 aa14.74□□□□□ -0.05
CLN3-217ENST00000565354 MROQ9BYG7 248 aa14.74□□□□□ -0.05
CLN3-217ENST00000565354 BRD7Q9NPI1 651 aa14.74□□□□□ -0.05
CLN3-217ENST00000565354 AASSQ9UDR5 926 aa14.74□□□□□ -0.05
CLN3-217ENST00000565354 KLHDC2Q9Y2U9 406 aa14.74□□□□□ -0.05
CLN3-217ENST00000565354 PSMD9O00233 223 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 DLGAP1O14490 977 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 TPD52L2O43399 206 aaKnown RBP14.73□□□□□ -0.05
CLN3-217ENST00000565354 SLC2A1P11166 492 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 NAT2P11245 290 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 OTX1P32242 354 aaPredicted RBP14.73□□□□□ -0.05
CLN3-217ENST00000565354 OPRL1P41146 370 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 MTNR1AP48039 350 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 EFNA4P52798 201 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 CXCR4P61073 352 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 ZMAT1Q5H9K5 638 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 SLC25A30Q5SVS4 291 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 ZCCHC24Q8N2G6 241 aaKnown RBP14.73□□□□□ -0.05
CLN3-217ENST00000565354 NEU4Q8WWR8 484 aaPredicted RBP14.73□□□□□ -0.05
CLN3-217ENST00000565354 RNFT2Q96EX2 444 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 PGAM5Q96HS1 289 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 NIPAL2Q9H841 368 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 CYSLTR2Q9NS75 346 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 CGGBP1Q9UFW8 167 aaPredicted RBP14.73□□□□□ -0.05
CLN3-217ENST00000565354 PURGQ9UJV8 347 aaKnown RBP14.73□□□□□ -0.05
CLN3-217ENST00000565354 CDC42EP3Q9UKI2 254 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 COPS3Q9UNS2 423 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 LRP12Q9Y561 859 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 SVEP1Q4LDE5 3571 aa14.73□□□□□ -0.05
CLN3-217ENST00000565354 ATP6V1G2O95670 118 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 CLIC3O95833 236 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 OR2T7P0C7T2 308 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 RAC2P15153 192 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 SELEP16581 610 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 LIPAP38571 399 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 CAPGP40121 348 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 ZNF81P51508 661 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 RIDAP52758 137 aaKnown RBP14.72□□□□□ -0.05
CLN3-217ENST00000565354 ZNF121P58317 390 aaPredicted RBP14.72□□□□□ -0.05
CLN3-217ENST00000565354 PSG7Q13046 419 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 HLXQ14774 488 aaPredicted RBP14.72□□□□□ -0.05
CLN3-217ENST00000565354 TIGD6Q17RP2 521 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 KRTAP24-1Q3LI83 254 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 ZNF691Q5VV52 312 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 DEGS2Q6QHC5 323 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 ZNF322Q6U7Q0 402 aaPredicted RBP14.72□□□□□ -0.05
CLN3-217ENST00000565354 COLCA1Q6ZS62 124 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 USP51Q70EK9 711 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 FAM57BQ71RH2 274 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 PGAP1Q75T13 922 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 OR2T27Q8NH04 317 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 RHOXF1Q8NHV9 184 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 HAVCR1Q96D42 359 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 OR8B4Q96RC9 309 aa14.72□□□□□ -0.05
CLN3-217ENST00000565354 C17orf100A8MU93 164 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 HAX1O00165 279 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 XRCC2O43543 280 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 SPRY3O43610 288 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 ZNF254O75437 659 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 GABRB1P18505 474 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 ACTC1P68032 377 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 ACTA1P68133 377 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 ADARB1P78563 741 aaKnown RBP14.71□□□□□ -0.05
CLN3-217ENST00000565354 IL18R1Q13478 541 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 CARTPTQ16568 116 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 GFOD2Q3B7J2 385 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 SNAI3Q3KNW1 292 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 C6orf52Q5T4I8 152 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 OR2T2Q6IF00 324 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 CLEC2AQ6UVW9 174 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 FBXW12Q6X9E4 464 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 ZNF679Q8IYX0 411 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 C8orf59Q8N0T1 100 aaPredicted RBP14.71□□□□□ -0.05
CLN3-217ENST00000565354 OR5AS1Q8N127 324 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 OR10A2Q9H208 303 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 RRP15Q9Y3B9 282 aaKnown RBP14.71□□□□□ -0.05
CLN3-217ENST00000565354 RPL36Q9Y3U8 105 aaKnown RBP14.71□□□□□ -0.05
CLN3-217ENST00000565354 PCDHGB1Q9Y5G3 927 aa14.71□□□□□ -0.05
CLN3-217ENST00000565354 GGT3PA6NGU5 568 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 H0YAE9 185 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 KRT8P05787 483 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 KITLGP21583 273 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 PSMA6P60900 246 aaKnown RBP14.7□□□□□ -0.06
CLN3-217ENST00000565354 ZNF91Q05481 1191 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 EGR3Q06889 387 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 RIPK1Q13546 671 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 ZNF829Q3KNS6 432 aaPredicted RBP14.7□□□□□ -0.06
CLN3-217ENST00000565354 PCGF3Q3KNV8 242 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 GLYATL3Q5SZD4 288 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 RFLNBQ8N5W9 214 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 OR52H1Q8NGJ2 320 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 OR2AE1Q8NHA4 323 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 SPRYD4Q8WW59 207 aaPredicted RBP14.7□□□□□ -0.06
CLN3-217ENST00000565354 NRG4Q8WWG1 115 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 OPA3Q9H6K4 179 aa14.7□□□□□ -0.06
CLN3-217ENST00000565354 DECR2Q9NUI1 292 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms