RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 OMPP47874 163 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 TRAP1Q12931 704 aaKnown RBP11.81□□□□□ -0.52
COMMD4-211ENST00000564815 MEP1BQ16820 701 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 RFX4Q33E94 735 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 TSEN54Q7Z6J9 526 aaKnown RBP11.81□□□□□ -0.52
COMMD4-211ENST00000564815 OR6V1Q8N148 313 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 SCCPDHQ8NBX0 429 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 TSSK2Q96PF2 358 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 CITED1Q99966 193 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 KCTD14Q9BQ13 255 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-211ENST00000564815 NSRP1Q9H0G5 558 aaKnown RBP11.81□□□□□ -0.52
COMMD4-211ENST00000564815 DPAGT1Q9H3H5 408 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 PDP1Q9P0J1 537 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-211ENST00000564815 KCNG2Q9UJ96 466 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 FAM96BQ9Y3D0 163 aa11.81□□□□□ -0.52
COMMD4-211ENST00000564815 IGLV1-36A0A0B4J1U3 117 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 IGHV1-69DA0A0B4J2H0 117 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 CENPVL3A0A0U1RRI6 287 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 BTBD17A6NE02 478 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 CD300LBA8K4G0 201 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 C22orf46C9J442 243 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 ARPC3O15145 178 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 CCDC22O60826 627 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 PPP1R3DO95685 299 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 IGHV1-69P01742 117 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 CA6P23280 308 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 IFNGR2P38484 337 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 SLC7A2P52569 658 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 SRSF4Q08170 494 aaKnown RBP11.8□□□□□ -0.52
COMMD4-211ENST00000564815 SF3A3Q12874 501 aaKnown RBP eCLIP11.8□□□□□ -0.52
COMMD4-211ENST00000564815 TAF9Q16594 264 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 RSPO1Q2MKA7 263 aaPredicted RBP11.8□□□□□ -0.52
COMMD4-211ENST00000564815 CLEC12AQ5QGZ9 265 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 SFRP4Q6FHJ7 346 aaPredicted RBP11.8□□□□□ -0.52
COMMD4-211ENST00000564815 SLC18B1Q6NT16 456 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 GDPGP1Q6ZNW5 385 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 LINC00346Q8IVM7 164 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 SLC26A10Q8NG04 563 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 OR4C15Q8NGM1 316 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 LRTOMTQ8WZ04 291 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 NMNAT3Q96T66 252 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 FGFR1OP2Q9NVK5 253 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 C14orf119Q9NWQ9 140 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 NDUFAF4Q9P032 175 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 SAMD4AQ9UPU9 718 aaKnown RBP11.8□□□□□ -0.52
COMMD4-211ENST00000564815 TRRAPQ9Y4A5 3859 aa11.8□□□□□ -0.52
COMMD4-211ENST00000564815 OOEPA6NGQ2 149 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 C3orf80F5H4A9 247 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 M0R135 149 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 SFTPBP07988 381 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 COX4I1P13073 169 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 GRK5P34947 590 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 GSK3BP49841 420 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 MPPED2Q15777 294 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 KRTAP27-1Q3LI81 207 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 C19orf18Q8NEA5 215 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 OR4K13Q8NH42 304 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 OR52J3Q8NH60 311 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 FANK1Q8TC84 345 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 LHX4Q969G2 390 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 ZNF799Q96GE5 643 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 IFT27Q9BW83 186 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 CNTD2Q9H8S5 307 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 TCF7L1Q9HCS4 588 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
COMMD4-211ENST00000564815 MRPL15Q9P015 296 aaKnown RBP11.79□□□□□ -0.52
COMMD4-211ENST00000564815 CYB5R1Q9UHQ9 305 aa11.79□□□□□ -0.52
COMMD4-211ENST00000564815 A6NLC8 198 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 DCTN6O00399 190 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 GPR137BO60478 399 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 GRPP07492 148 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 HIST1H1CP16403 213 aaKnown RBP11.78□□□□□ -0.52
COMMD4-211ENST00000564815 DDOSTP39656 456 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 ARF6P62330 175 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 RELBQ01201 579 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 TAF13Q15543 124 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 GLYATQ6IB77 296 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 CFAP77Q6ZQR2 320 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 NAA40Q86UY6 237 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 CMTM4Q8IZR5 234 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 NPRL2Q8WTW4 380 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 DMRTB1Q96MA1 342 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 RBM4BQ9BQ04 359 aaKnown RBP11.78□□□□□ -0.52
COMMD4-211ENST00000564815 ADAT1Q9BUB4 502 aaKnown RBP11.78□□□□□ -0.52
COMMD4-211ENST00000564815 OR52D1Q9H346 318 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 OPA3Q9H6K4 179 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 C1orf123Q9NWV4 160 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 ARMCX1Q9P291 453 aa11.78□□□□□ -0.52
COMMD4-211ENST00000564815 TRBV4-1A0A0J9YWV2 114 aa11.77□□□□□ -0.53
COMMD4-211ENST00000564815 hCG_1807616A0A1W2PRN6 198 aa11.77□□□□□ -0.53
COMMD4-211ENST00000564815 NME4O00746 187 aa11.77□□□□□ -0.53
COMMD4-211ENST00000564815 CLPXO76031 633 aa11.77□□□□□ -0.53
COMMD4-211ENST00000564815 GADD45GO95257 159 aa11.77□□□□□ -0.53
COMMD4-211ENST00000564815 PTBP3O95758 552 aaKnown RBP11.77□□□□□ -0.53
COMMD4-211ENST00000564815 MMP9P14780 707 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms