RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 PAHP00439 452 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 EIF4EP06730 217 aaKnown RBP13.6□□□□□ -0.23
COMMD4-210ENST00000564587 BDKRB2P30411 391 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 ART1P52961 327 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 IFITM3Q01628 133 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 PLP2Q04941 152 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 GUSBP1Q15486 140 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 RSPO1Q2MKA7 263 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-210ENST00000564587 HACD4Q5VWC8 232 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 STEAP3Q658P3 488 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 Q6ZNX1 250 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 OR1M1Q8NGA1 313 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 OR1J2Q8NGS2 313 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 LGALS14Q8TCE9 139 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 S100A16Q96FQ6 103 aaKnown RBP13.6□□□□□ -0.23
COMMD4-210ENST00000564587 ZFP3Q96NJ6 502 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 UQCC2Q9BRT2 126 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 ABCG5Q9H222 651 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 PLEKHA1Q9HB21 404 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 NEK6Q9HC98 313 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 TUBD1Q9UJT1 453 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 N6AMT1Q9Y5N5 214 aa13.6□□□□□ -0.23
COMMD4-210ENST00000564587 FIGNL2A6NMB9 653 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 C1QTNF9BB2RNN3 333 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 H3BSH0 61 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 SULT1B1O43704 296 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 DHRS3O75911 302 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 PTTG1O95997 202 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 ALDOBP05062 364 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 C1QTNF9P0C862 333 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 SLC2A1P11166 492 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 IL7P13232 177 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 THBS4P35443 961 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 OXA1LQ15070 435 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 PABPC1L2AQ5JQF8 200 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 C1orf100Q5SVJ3 147 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 TRIQKQ629K1 86 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 FAM166AQ6J272 317 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 ZNF529Q6P280 563 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 PLXDC2Q6UX71 529 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 DCDC5Q6ZRR9 648 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 CENPSQ8N2Z9 138 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 OR4M1Q8NGD0 313 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 OR1K1Q8NGR3 316 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 OR5H6Q8NGV6 325 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 OR14K1Q8NGZ2 314 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 AKR7LQ8NHP1 331 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 PP6455Q8WZ26 134 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 COX4I2Q96KJ9 171 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 SORCS2Q96PQ0 1159 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 C12orf49Q9H741 205 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 PRSS50Q9UI38 385 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 TP53TG5Q9Y2B4 290 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 V9GYS6 101 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 ARHGAP21Q5T5U3 1957 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 SETXQ7Z333 2677 aaKnown RBP13.59□□□□□ -0.23
COMMD4-210ENST00000564587 ZFYVE26Q68DK2 2539 aa13.59□□□□□ -0.23
COMMD4-210ENST00000564587 LOC100289279A0A1B0GTE1 492 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 MBD3L4A6NDZ8 208 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-210ENST00000564587 MBD3L3A6NE82 208 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-210ENST00000564587 MBD3L5A6NJ08 208 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-210ENST00000564587 MAGEB3O15480 346 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 XRCC2O43543 280 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 LCATP04180 440 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 HTR2CP28335 458 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 ASPHD2Q6ICH7 369 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 ZNF585AQ6P3V2 769 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 TFAP2EQ6VUC0 442 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 Q8N402 240 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 POC5Q8NA72 575 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 C19orf18Q8NEA5 215 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 OR5M9Q8NGP3 310 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 MBD3L2Q8NHZ7 208 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-210ENST00000564587 AKAP1Q92667 903 aaKnown RBP eCLIP13.58□□□□□ -0.24
COMMD4-210ENST00000564587 BCL2L2Q92843 193 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-210ENST00000564587 ADAT3Q96EY9 351 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-210ENST00000564587 BOD1Q96IK1 185 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 FAM71F1Q96KD3 344 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-210ENST00000564587 ZNF319Q9P2F9 582 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 OR5V1Q9UGF6 321 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 MED12LQ86YW9 2145 aa13.58□□□□□ -0.24
COMMD4-210ENST00000564587 URB1O60287 2271 aaKnown RBP13.57□□□□□ -0.24
COMMD4-210ENST00000564587 K7EM74 188 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 CTDSPLO15194 276 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 HLA-DQB1P01920 261 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 SERPINA5P05154 406 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 DBHP09172 617 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 OCMP0CE72 109 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-210ENST00000564587 AZGP1P25311 298 aaKnown RBP13.57□□□□□ -0.24
COMMD4-210ENST00000564587 MNDAP41218 407 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 INPP1P49441 399 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 MRPS10P82664 201 aaKnown RBP13.57□□□□□ -0.24
COMMD4-210ENST00000564587 UNQ6494/PRO21346Q6UXR6 183 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 Q6ZT83 130 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 DNAAF1Q8NEP3 725 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 C1orf162Q8NEQ5 155 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-210ENST00000564587 PTX4Q96A99 478 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 FAM3DQ96BQ1 224 aa13.57□□□□□ -0.24
COMMD4-210ENST00000564587 HAVCR1Q96D42 359 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms