RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 DRAM2Q6UX65 266 aa16.79■□□□□ 0.28
SHCBP1-203ENST00000564272 ERI1Q8IV48 349 aaKnown RBP16.79■□□□□ 0.28
SHCBP1-203ENST00000564272 KLHL36Q8N4N3 616 aa16.79■□□□□ 0.28
SHCBP1-203ENST00000564272 SPRYD4Q8WW59 207 aaPredicted RBP16.79■□□□□ 0.28
SHCBP1-203ENST00000564272 OCEL1Q9H607 264 aa16.79■□□□□ 0.28
SHCBP1-203ENST00000564272 PATZ1Q9HBE1 687 aaKnown RBP16.79■□□□□ 0.28
SHCBP1-203ENST00000564272 N6AMT1Q9Y5N5 214 aa16.79■□□□□ 0.28
SHCBP1-203ENST00000564272 ZNF878C9JN71 531 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 PRKACGP22612 351 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 MDH2P40926 338 aaKnown RBP16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 PMELP40967 661 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 BLVRAP53004 296 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 EIF2B1Q14232 305 aaKnown RBP16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 GINS1Q14691 196 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 LIPNQ5VXI9 398 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 OR6N2Q8NGY6 317 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 DVL3Q92997 716 aaPredicted RBP16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 INTS14Q96SY0 518 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 KCNJ15Q99712 375 aa16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 REPIN1Q9BWE0 567 aaKnown RBP16.78■□□□□ 0.28
SHCBP1-203ENST00000564272 CD300LBA8K4G0 201 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 CEACAM18A8MTB9 384 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 F5H0A9 414 aaPredicted RBP16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 J3QLI3 93 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 IFNL4K9M1U5 179 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 FOXH1O75593 365 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 RGS9O75916 674 aaPredicted RBP16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 HOXB6P17509 224 aaKnown RBP16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 CA6P23280 308 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 GSTT1P30711 240 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 MAB21L1Q13394 359 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 FAM201AQ5SY85 155 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 PRAMEF6Q5VXH4 476 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 DPY19L4Q7Z388 723 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 C1QL2Q7Z5L3 287 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 CADM1Q9BY67 442 aaKnown RBP16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 OR51V1Q9H2C8 321 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 YY1AP1Q9H869 796 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 DNAJB9Q9UBS3 223 aa16.77■□□□□ 0.28
SHCBP1-203ENST00000564272 GGT3PA6NGU5 568 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 GLCEO94923 617 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 OSMP13725 252 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 EPHA1P21709 976 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 CD200P41217 278 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 CX3CR1P49238 355 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 OR8G1Q15617 311 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 PLBD1Q6P4A8 553 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 MUC20Q8N307 709 aaPredicted RBP16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 PAPD5Q8NDF8 572 aaKnown RBP16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 ZMYND19Q96E35 227 aaPredicted RBP16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 AMELYQ99218 206 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 ADAT1Q9BUB4 502 aaKnown RBP16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 ABHD6Q9BV23 337 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 C7orf69Q9H7B7 122 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 ZNF556Q9HAH1 456 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 MMP26Q9NRE1 261 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 OPN4Q9UHM6 478 aa16.76■□□□□ 0.27
SHCBP1-203ENST00000564272 GSC2O15499 205 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 TBX1O43435 398 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 PAICSP22234 425 aaKnown RBP16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 GATA3P23771 443 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 GATA4P43694 442 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 RAD23AP54725 363 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 GRB2P62993 217 aaKnown RBP16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 ZNF181Q2M3W8 571 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 TIGD4Q8IY51 512 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 TEX29Q8N6K0 151 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 OR56B2PQ8NGI1 322 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 RNF133Q8WVZ7 376 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 MARCH7Q9H992 704 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 UFSP2Q9NUQ7 469 aa16.75■□□□□ 0.27
SHCBP1-203ENST00000564272 LRRC30A6NM36 301 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 PRR23D1E9PI22 279 aaPredicted RBP16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 TRAPPC2LH3BP13 241 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 SELENOFO60613 162 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 FAM20BO75063 409 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 TIPRLO75663 272 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 VENTXO95231 258 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 ANXA2P07355 339 aaKnown RBP16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 PRR23D2P0DMB1 279 aaPredicted RBP16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 ANXA8P13928 327 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 HSD11B1P28845 292 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 HOXA4Q00056 320 aaPredicted RBP16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 CDK5Q00535 292 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 BNIP1Q12981 228 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 MPPED2Q15777 294 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 TMEM236Q5W0B7 351 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 CELF2-AS1Q8N7Q2 184 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 DEFB108BQ8NET1 73 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 BBS1Q8NFJ9 593 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 NTN4Q9HB63 628 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 TMEM165Q9HC07 324 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 DNAJC27Q9NZQ0 273 aa16.74■□□□□ 0.27
SHCBP1-203ENST00000564272 PPIAL4EA0A075B759 164 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 PPIAL4CA0A0B4J2A2 164 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 A8MXK9 166 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 PPIAL4DF5H284 164 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 XRCC2O43543 280 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 PPIAL4FP0DN26 164 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 RPS2P15880 293 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms